Aeromonas sp. CU5: CK911_14135
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Entry
CK911_14135 CDS
T05327
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aem03009
]
CK911_14135
Enzymes [BR:
aem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CK911_14135
Ribosome biogenesis [BR:
aem03009
]
Prokaryotic type
rRNA helicases
CK911_14135
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
P-loop_SecA
Cas3-like_C_2
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
ATL93838
UniProt:
A0A291TL96
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All DBs
Position
3179476..3180855
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AA seq
459 aa
AA seq
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MNNSEFSSLNLSPALQENLISLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFGL
GLLAQLNVHRLEVQALVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTQTAPQSATL
GFGAHIAVGTPGRILKHLEQGTLELSGLKTLVLDEADRMLDMGFGEEINRVISYAPQQRQ
TLLFSATYPEGIAQMSRGVQRNPVEVSVESLHEGSAIEQKLYEVPFGERLDALTWLLSHY
QPASCVVFCNTKRACNDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATD
VAARGLDIKELGAVINYELTYDPEIHVHRIGRTGRAGQQGLALSLYQPNEAQRVNFIEEY
QQAPMPQGDLTLIGRDIKPIAPQMVTLSIDAGRKTKVRAGDILGALTGEGGIAGADVGKI
QISEQYSYVAVKCSVASAALKRLQEGKIKGRTYRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacagcgaatttagcagcctcaatctctcccccgccctgcaagagaacctcatc
agcctgggttatctgcagatgacaccgatccaggcccagagtctgcccctggtgctcgat
ggcaaagacctgatcgccaaggctaaaaccggtagcggcaagaccgccgccttcggcctt
ggcctgctggcacagctcaacgtccatcgtctcgaagtgcaggcgctggtgctctgtccg
acccgcgaactggcagatcaggtggcgcaggagatccgtcgtctggcccgcgccctgccc
aacgtcaagctggtgaccctgtgcggcggcacccagactgcgccccaatcggccacgctg
ggctttggcgcccacatcgctgtcggtaccccgggccgcatcctcaagcatctggagcaa
ggcaccctggagttgtctggccttaaaaccctggtgctggacgaagccgaccggatgctg
gacatgggctttggcgaagagatcaaccgggtcatcagctatgctccccagcagcgccag
accctgctgttctccgccacctacccggaagggatcgcccagatgagccgcggtgtgcag
cgcaatccggtcgaggtgagtgtcgagtctctccatgaggggagcgccatcgaacagaag
ctctatgaggtgccatttggcgagcgcctcgacgccctcacctggttgctgagccactat
cagccagcctcctgcgtggtgttctgcaacaccaaacgcgcctgcaacgacgtggctgat
catctggccgccaaaggtttctcggcgctggcactgaacggcgatctggaacagcgcgag
cgggatcaggtgctggtgcgctttgccaacggcagtgccaccattctggtggccaccgac
gtggcagcccgcggcctcgacatcaaagagctgggcgccgtcatcaactacgagctgacc
tatgacccggagatccatgtccatcgcatcggtcgtaccggccgtgctggccagcagggt
ctggccctgagcctctatcagccgaacgaagcccagcgcgtcaactttatcgaagagtac
cagcaggccccgatgccgcagggcgacctcacgctgattggccgtgacatcaagccgatt
gcgccacagatggtgaccctctccatcgatgcgggccgcaaaaccaaggtgcgagctgga
gatattctgggcgccctgactggcgaaggcggtattgccggtgccgatgtcggcaagatc
cagatctccgagcagtactcctacgtcgcggtaaaatgcagtgtggcgagtgccgccctc
aagcggctgcaagaaggcaaaatcaaggggcgcacctaccgcgcccgcaaactgggctaa
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