KEGG   Aeromonas sp. CU5: CK911_14435
Entry
CK911_14435       CDS       T05327                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
aem  Aeromonas sp. CU5
Pathway
aem03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aem00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CK911_14435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aem03400]
    CK911_14435
DNA repair and recombination proteins [BR:aem03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CK911_14435
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CK911_14435
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 AAA_16 nSTAND1 RsgA_GTPase AAA_21 AAA_25 AAA_23 DnaJ_CXXCXGXG nSTAND3 Viral_helicase1 NACHT cobW ScfRs
Other DBs
NCBI-ProteinID: ATL93883
LinkDB
Position
complement(3245019..3247847)
AA seq 942 aa
MEKIVVRGARTHNLKNINLTLPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PTHEIPLAAQTISQMVDQVLAQPEGSKLMLLAPVVRDRKGEHSKLLENLAAQGYIRARID
GEVCDLSDPPTLELHKKHTIEVVVDRFKVRDDLALRLAESFETALTLSGGIVLVVPMDGE
EGVAPMTFSANFACPECGYSMSELEPRIFSFNNPAGACPTCDGLGVQQYFDPAKVIGDPS
ISLANGAIRGWDKRSFYYFQMLKSLSEHYKFDLDTPWEDLPPKTQEVILRGSARTEIEFR
YMNDRGDVVVRKHPFEGILHNLERRYRETESNSVREELSKYIANKSCTSCGGSRLRQEAR
HVFVDNRNLPAIAEQSIGDALAFFEGLNLTGQRGQIAEKILKEIIERLGFLVNVGLNYLS
LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGN
TVIVVEHDEDAIRLADHVLDIGPGAGVHGGEIVAQGTPQQIIDNPASLTGDYLSGRKQIA
IPDERTPLSGKWLKLKGASGNNLRNVNLDLPLGVMTCVTGVSGSGKSTLINDTLFRIAHR
ELNKATESTPAPYRSVEGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELLSGTQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVKY
KGKNIHEILDMTVEDAREFFDPVPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRDTGQTLYILDEPTTGLHFHDIQQLLKVLHQLRDRGNTIVIIEHNLDVVKTADW
IVDLGPEGGAGGGRILVTGTPEEICGNKESHTARFLRPLLTR
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggaaaaaatcgtggtccggggtgctcgcacccacaacctcaagaacatcaatctgacc
ctgccccgcgacaagctgatcgtggtgaccggtctctccggctccggcaaatcctcgctg
gcgttcgataccctctatgccgaagggcagcgccgctatgtggagtcgctctccgcctat
gcccgccagtttctctctttgatggagaagccggacgtcgatcatattgaggggctttca
ccggccatctctatcgagcagaagtctacttcccacaacccgcgctcgactgtcggcacc
attaccgagatttacgactatctgcggctgttgttcgcccgggtcggtgagccgcgctgc
ccgactcacgagatcccactggccgcccagaccatcagtcagatggtggatcaggtgctg
gcacagcccgagggcagcaagctgatgctgctggctccggtggtgcgagatcgcaagggg
gagcacagcaagctattggaaaatctggcggcgcagggctacatccgtgcccgtatcgat
ggcgaggtgtgcgatctttccgatcctcctacgctggagctgcacaagaagcacaccatc
gaggtggtggtggatcgcttcaaggtgcgcgatgacctggcgctgcggctcgccgaatcg
ttcgagacggcgctaaccctctccggcggtatcgtactggtagtgccgatggacggggag
gagggggttgcccccatgaccttctccgccaactttgcctgccccgagtgtggctactcc
atgtcggagctggagccgcgcatcttctccttcaacaacccggccggtgcctgccccacc
tgtgatggcctcggggtgcagcaatattttgatccggccaaggtgatcggtgatccttcc
atcagtttggccaacggcgccatccgtggttgggacaagcgcagcttctactatttccag
atgctgaaatccctctccgaacactacaagttcgatctggatacgccgtgggaagatctg
ccgccgaagacccaggaggtgatcctgcggggctctgctcgcaccgagatcgagttccgt
tacatgaatgatcgcggcgacgtggtggtgcgcaagcacccgtttgaggggatcttgcac
aacctggagcgccgctatcgggagaccgagtccaactcggtgcgcgaagagctctccaag
tacatcgccaacaaatcttgtaccagctgcggcggtagcagactgcggcaagaggcgcgc
cacgtgttcgtggataaccgtaacctgcccgccatcgccgagcagtccatcggcgatgcg
ctcgccttcttcgaggggctgaacctgaccggtcagcgcggtcagattgccgagaagatc
ctcaaagagatcattgagcggcttggcttcctggtgaatgtgggtctcaactacctgagc
ctgtcacgcagcgccgaaactctctctggcggcgaagcccagcgcattcgactggcgagc
cagattggtgccgggctggtgggggtcatgtatgtgctcgatgaaccctctatcggcctg
caccagcgcgacaacgagcgtctgctcaagaccctcactcatctgcgcgatctgggcaac
accgtcatcgtggtggagcacgacgaggacgccattcgtctcgccgaccacgtgctcgat
atcggcccgggggcgggcgtgcatggcggcgaaattgtggcgcagggcaccccccagcag
atcatcgacaatccagcttcactgaccggtgactacctctctggccgcaagcagattgcc
atccctgatgaacgtaccccgctcagcggcaagtggctgaagctcaaaggggcgagcggt
aacaacctgcgcaacgtcaatctggatttgccgctaggggtgatgacctgcgttaccggc
gtctccggctccggcaagtcgaccctgatcaacgacaccctgttccgcattgcccaccgc
gagctgaacaaggcgaccgagtccacgccggcaccctatcgcagtgttgaggggctggag
catctggacaaggtggttgatatcgatcagagccccatcggccgtaccccgcgctccaac
ccggccacctataccggcctgttcaccccgatccgcgagctgctttccggcactcaggag
gcacgctcccgtggttataagcccggccgtttctccttcaacgtgaaagggggccgttgc
gaggcctgtcagggggacggggtgatcaaggtagagatgcactttttgccggatgtctac
gtgccgtgtgatgtctgcaagggcaagcgctacaaccgcgagacgctggaggtgaagtac
aagggcaagaacatccacgagatcctcgacatgacagtggaagatgcccgcgaattcttc
gacccggtgccggcggtggcgcgcaagctgcagaccttgatggatgtgggcctctcctat
atccggctcggccagtcagccaccaccctgtctggcggtgaggcgcagcgggtcaagctg
gcgcgggagttgtcgaaacgcgataccggtcagacgctttatattctggatgagccgacc
accgggctgcacttccacgatatccagcagctgctcaaggtgctgcaccagctgcgggat
cggggcaacacgattgtcatcatcgagcacaatctggacgtggtgaaaaccgctgactgg
atcgtcgatctggggccggaaggaggtgccggtggaggccgcattctggtgacggggacc
ccagaggagatctgcggcaataaagagtctcatacagcacgttttttgcggccgctattg
acgcgataa

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