Aeromonas sp. CU5: CK911_18465
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Entry
CK911_18465 CDS
T05327
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CK911_18465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aem03021
]
CK911_18465
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_18465
Enzymes [BR:
aem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CK911_18465
Transcription machinery [BR:
aem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CK911_18465
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CK911_18465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
ATL94570
LinkDB
All DBs
Position
4082574..4083563
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANADISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcatgcgaaagtgactcttgagccacttgagcgtggctttggccacacgctgggc
aatgctctgcgtcgtattttgctgtcatctatgcccggttgtgcagttactgaagtcgaa
attgacggggtactgcatgagtacagcagcaaagaaggtgtgcaggaagacattcttgaa
attctgcttaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccacctgaccggtgctaatgctgacatc
agcatgcgcctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgatgaagagcgtccgataggtcgcctgctgctggactctgcgttcagccccatc
gttcgtattgcctacaatgttgaggcagcacgtgtggaacagcgtaccgacttggacaag
ctcgtcatcgacatggagaccaatggtactctggatcctgaagaagctatccgtcgctct
gccactattttggctgagcagctggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctgcgtcctgtcgatgatttg
gagctgacagttcgttctgcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaaaactcctaacctcggtaagaagtccctg
actgagatcaaggatgtgttggcctcccgtggtctgtctcttggcatgcgccttgagaat
tggccgcccgccagcatcgctgacgagtaa
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