Aeromonas sp. CU5: CK911_18560
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Entry
CK911_18560 CDS
T05327
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aem
Aeromonas sp. CU5
Pathway
aem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CK911_18560 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aem03400
]
CK911_18560 (recB)
Enzymes [BR:
aem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CK911_18560 (recB)
DNA repair and recombination proteins [BR:
aem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CK911_18560 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Biotin_carb_C
Motif
Other DBs
NCBI-ProteinID:
ATL94585
UniProt:
A0A291TNE7
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All DBs
Position
4106125..4109733
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AA seq
1202 aa
AA seq
DB search
MANPLNTLRFPLHGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGADAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRGRIHEARLAFMRGHSSDTLLAQLLAEVEDHELAARR
LLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWRAEFY
PVDKTLASSVRALWPSPAALLREMNGWLDNSELEIHPALGDETLAARHQAAMARIAAVKG
EWLAQMDEIRRQTDGQVSRYTGKNYEGWLAKIGDWAQEESSGYAIPKELERFGQTVLEEN
LKKGGAVPTLPLFSQIDELLASRPGITDLILQRAAKVVRSRMQASKRQAHQLSFDDLLKD
LDGALGSSLGERLCDRIRTTYRVAMIDEFQDTDPQQYRIFHRLYGGHQNTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSSALVGAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALLLDGATAPVLHCWQLTGQPTFNRGGYQSKMARATAAEIHRLLTLAREGK
ALIGDKAVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLEQTEAREILLILH
ACQNPSEERSLRAALATGLFDLDAKALDGLASDERAWESAVQEFMEYRKIWHRRGVLAML
RALLHRRNLASFLLASPYGERRLTNFLHLGELLQQVSSELDGEYALLRWLGEAVSRPNGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRTAETPLYHEADEAGNRTILD
LTGADSSLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRAGAGKLEKTDLHHTAIGY
LLQKGEEGDAQTLATALTELAQALPGVAVGEPSLTRPAPLPPEEEQLGEPQVRHFTGSLE
RDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAATLAAEQPEEAPQPSIFTFPKGAR
PGTLLHSLFETIDFQSAAGEPLAEHIATLLAQDGFDESWAQVLQQQVEAVLDTPLETGFG
EPVRLRDLSADRKQVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGMLKGF
IDLVFEWQGRWYLLDYKSNHLGMSPADYSRPALERAMAEHRYDLQYQLYSLALHRLLTLR
LPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDELFRNGDRSGGVSSTELNEV
EA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggctaacccgctcaataccctgcgttttcccctccatggtgaacgactgatcgaagcc
tctgccggtaccggcaagacctacaccatcgccggtctctacctgcgcctgctgctgggc
cacggcccgctcattgaagagggggccgatgccggtcagccgagcgcccacgaacggccg
ctctcggtgaccgagattctggtggtgacctttaccgaagcggccaccgccgagctgcgc
gggcggatccgtggtcgcatccacgaggcgcggctcgcctttatgcgcggccacagcagt
gacaccctgctggcccaactgctggcagaggtggaggatcatgagctggcggcccgccgc
ctgctggccgccgagcggcagatggacgaggcggcggtctttaccatccacggcttctgc
cagcggatgctcaagcagaacgccttcgagtcgggcgccctttttgaaaccgaatttctc
accgacgacagccagctcaggctgcaggcggtgagcgactactggcgtgccgagttctat
ccggtggataaaaccctcgccagttcggtgcgcgcgctctggccgagccccgccgccctg
ctgcgggagatgaacggctggctcgacaacagcgagctggagatccaccccgcgctgggg
gacgaaacccttgccgctcgccatcaggcagctatggcccgcattgctgcggtgaagggc
gaatggctggcgcagatggacgagatccgccgccagacggatgggcaagtaagccgctac
accggcaagaactacgaagggtggcttgccaagatcggcgattgggcacaggaagagagc
agtggctacgccattcccaaggagctggagcgcttcggccagacggtgctggaggagaac
ctcaagaaggggggcgcagtgccgaccctgccgctgttcagccaaatcgatgaactgttg
gcgagccgtcccggtattacggatcttatcctgcaacgggccgccaaagtggtgcgcagc
cggatgcaggcgagcaagcgccaagcccatcagctctcgttcgatgacctgctcaaagac
ctcgatggcgcgctcggctccagcctgggcgagcggctctgcgatcgtattcgcaccacc
tatcgggtggcgatgatcgatgaatttcaggataccgacccccagcagtaccgcatcttc
caccggctttacggcggtcatcagaatacggcgctgttgatgatcggtgaccccaagcag
gccatctacggctttcgcggcgccgacatctttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctcgggcgcaactggcgctccagcagtgcgctggtgggggcggtc
aacggcctgttcgagcgggcaaaagatccctttatctacgaagcggatatccccttcctg
ccggtggaggcgcagggtaagagcaaggcgctgctgctcgatggcgcaactgcacctgtg
ctccactgctggcagctgaccggccagcccaccttcaaccgggggggttaccagagcaag
atggcccgcgccaccgccgccgagatccaccgcctgctgaccctggcccgcgagggcaag
gcgctgataggcgacaaggcggtgaaggccggggatatcgccgtgctggtacgcaccggc
gccgagggcaagctggtgcagcaggagctggcgcggctcgccatcgcctccgtttatctg
tcgaaccgcgagagcgtgctggagcagacggaggcgcgggagatcttgcttatcctgcac
gcctgccagaacccgagcgaagagcgcagcctgcgggcggcgctcgccaccggcctgttt
gatctggatgccaaggcgctcgatgggctggccagcgacgagcgggcgtgggagagcgcg
gtgcaggagtttatggagtaccgcaagatctggcatcgccgtggcgtgctggccatgctg
cgggccctgctgcaccggcgcaatctcgcctccttcctgctggcgagcccctatggcgag
cggcggctgaccaacttcctccatcttggcgagctgctgcaacaggtgagcagcgagctg
gacggggagtacgccctgctgcgctggctgggggaggcggtgagtcgccccaacgggcag
gatgcggagcaggtactacggctcgaatccgagcggaaattggtgcagatcgtcaccatc
cacaaatccaaggggctggagtacccgctggtgttcctgccctttatctgcagccacaga
accgccgagaccccgctctatcacgaggcggatgaggcgggcaatcgcaccattctcgac
ctgaccggcgccgactcgtcgctcgccgaagcggacagggagcgccttgccgaagatttg
cggctgctctatgtggcactgacccggggcgtctacgccacctggctcgggctggcgccg
gtgcgggcgggggcgggcaagttggagaagaccgacctgcaccacaccgccatcggctac
ctgctgcaaaagggcgaagagggggatgcgcagacgctggcgaccgctctcaccgagctg
gctcaggcattgcccggggtggccgtcggtgagccctcgctcacccgtccggccccgctg
ccgccagaggaggagcagctgggcgagccgcaggtgcgccactttaccggttcccttgag
cgggactggtggatcagctcctactccgggctggcggcgcaggggcacggtcacagcaag
ggtgtcttggccaatcccggcttcgatgacgaggtggtgaccgaagcggccacgctggct
gccgagcaaccggaagaggcgccccagccctccatcttcaccttcccgaaaggggcacgc
cccggcaccttgctgcacagcctgttcgagaccatcgactttcagagtgccgctggcgag
ccgctggcagagcatatcgccaccctgctggcgcaggatggcttcgacgaaagctgggcc
caagtgctgcaacagcaggtggaggcggtgctcgataccccgttggaaacgggctttggc
gagccggtgcggctgcgggacttgagtgccgaccgcaagcaggtggagctggagttcttc
ctgcccatggggcgggtgacggcaccggcgctgaccgcgctctgccagcagcatgacccg
ttgtcgcggggcaacaagccgctgagctttgccaccgtgcaggggatgctcaagggcttt
atcgatctggtgttcgagtggcaggggcgctggtatctgctcgactacaaatcgaaccat
ctcggcatgagccccgccgattacagccgtcctgcgttggagcgggcgatggcggagcat
cgctacgacctgcaataccagctctactcgctggcgctgcaccggctgctcaccctgcgc
ctgccgggctacgacttcgagcagcactttggcggcgttttctatctgttcctgcgtggc
atgccgcaggggggcatcttccatacccgcccgagccgtgaactggtgctggggctggat
gagttgtttagaaacggtgatcgctctggcggtgtgtcatcaacagaattaaacgaggta
gaggcatga
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