Aeromonas sp. CU5: CK911_19250
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Entry
CK911_19250 CDS
T05327
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
aem
Aeromonas sp. CU5
Brite
KEGG Orthology (KO) [BR:
aem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aem03021
]
CK911_19250
Transcription machinery [BR:
aem03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CK911_19250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Cas3-like_C_2
AAA_22
Flavi_DEAD
DUF1285_C
Motif
Other DBs
NCBI-ProteinID:
ATL94712
UniProt:
A0A291TNJ7
LinkDB
All DBs
Position
complement(4250832..4253699)
Genome browser
AA seq
955 aa
AA seq
DB search
MPFALGQRWISDTETDLGLGTVVAVEGRMVTLLFPATGENRMYAKEEAPVTRVSFNVGDQ
IATHEDWTMTVEEVQEKDGLLIYVGVRTDNDEPVALKEVFLSNFIKFNKPQERLFAGQID
RMSRFTLRYEALIHQHKRRLNPTRGLAGGRVSLIPHQIYIAHEVGHRYAPRVLLADEVGL
GKTIEAGMIIHQQLLSGRAHRVLILLPETLQHQWLVEMLRRFNLHFSLFDEERCIEAFAD
AENPFETEQLVICSLDFLRKKRRRFEQVLEAEWDLLVVDEAHHLEWSEEAPSRAYEMVEA
LAEQVPGVLLLTATPDQLGHQSHFARLRLLDPERFYDYEAFLAEEQAYGQVASAAQELLD
GETLSDEARQILASQLEGLDLGDAAARQQAVAKLLDQHGTGRVLFRNSRANIQGFPERHL
NVYPMPLPEQYKTAIKVMGMMGGNGGDLQTRALRYLYPEKIFQQFEGDNATWTQFDPRVE
WLLELLLSARQQKVLVICSEAATAIALEEALRTREGIRGAVFHEGMTILERDKASAYFAQ
QESGAQVLLCSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDRIGQQNIVEIHVPY
LEGTAQRALQLWYHDGLDAFEQTCPTARPVFEAVRDELFELLAANTGDQATLDALLIKTR
ELHEPLKARLEQGRDRLLEIHSSGGAAAQQLVDKLAAEDGDTGMISFALKMFDEIGVNQD
DRGENALVLTPGDHMLVSSFPGLPQDGMTITFDRPTALSRDDMALLCWDHPMMRGGIDLI
LGSEIGATSVALLKNKALPIGSILLELIFVAESAAHPQLYRFMPPTPIRLLMDKNGQNLG
EKVAFDAFNRQLTPVNRHLGSKLVTASQPVIHGLIGKGQPIAEELKAVIVDKARAQMAQT
LQQDLDRLEALKAVNPSVRDSELDYLRDLQAELHHLIDQTQLKLDAIRFIVVTHN
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgccttttgcacttggccagcgttggattagtgatacagagacggatctggggttaggg
actgtcgttgctgttgaaggacgcatggttaccctgttgtttccggcgaccggtgaaaac
cgtatgtatgccaaagaagaggcgccggtaacccgggtcagcttcaatgtgggcgaccag
atcgccactcacgaagactggaccatgacggtcgaagaagtgcaggagaaagatggcctg
cttatatatgtaggtgttcgcaccgacaatgatgagcccgttgccctcaaggaagtgttc
ctcagcaactttatcaagttcaacaaaccgcaggagcgcctgttcgccggtcagattgat
cggatgtctcgctttaccctgcgctatgaagcgctgatccatcagcacaagcgtcgcctt
aatccgacccgtgggctggccggtggccgggtcagcctgatcccgcaccagatctatatc
gcccatgaagtgggtcaccgctacgccccacgcgtactgctggcagatgaagtgggtctg
ggcaagaccattgaagcgggcatgatcattcatcagcagctgctctccggccgcgcccat
cgggtgctgatcctgctgcccgaaaccctgcagcaccagtggctggtcgagatgctgcgc
cgcttcaacctgcacttctccctgtttgacgaggagcgctgcatcgaggcgttcgccgat
gcggagaaccccttcgagaccgaacagctggtgatctgcagcctcgacttcctgcgcaag
aagcgtcgccgctttgagcaagtgctggaagccgagtgggatctgctggttgtcgacgaa
gcgcaccatctggagtggagcgaagaggcacccagccgcgcctacgaaatggtggaagcg
ctggccgaacaggtgccgggcgtgctgctactgaccgctaccccggatcagctgggccac
cagagccactttgcccgtctgcgcctgctcgaccccgagcgtttttacgactacgaggcc
ttcctcgccgaagagcaggcttatggccaggtcgccagcgcagcgcaagagctgctggat
ggcgaaaccctgagcgatgaagccaggcagatccttgccagtcagctggaaggactggat
ctcggcgatgccgccgcccgtcagcaggcggtcgccaagctgctcgatcagcacggcacc
ggccgggtgctgttccgtaacagccgcgccaacattcagggcttccccgagcgtcacctc
aacgtctaccccatgccgctaccggagcagtacaagactgccatcaaggtgatgggcatg
atgggtggcaacggtggcgatctgcagacccgcgccttgcgctacctctatcccgagaag
atcttccagcagttcgaaggtgacaacgccacctggacccagttcgacccccgcgtcgag
tggttgctggagctgctgctctctgcccgccagcagaaagtgctggtgatctgctccgaa
gcggccaccgccattgcgctggaagaggcgttgcgtacccgtgaagggatccgtggtgcc
gtgttccacgaagggatgaccattctggagcgggataaagcctccgcctatttcgcccag
caagagagtggtgctcaggtgctgctctgctccgagatcggttcagaaggtcgtaacttc
cagtttgccagccatctggtgctgttcgatctgcccctcaatccagatctgctggagcag
cgtatcggccgtctggatcgtattggccaacagaacatcgtcgagatccacgtcccttat
ctggaaggaaccgcccagcgcgccctgcagctctggtatcacgatggtctggatgcgttc
gagcagacctgcccgactgcccgcccggtattcgaggcggtgcgtgacgagctgttcgag
ctgctggccgccaacactggcgatcaggcaactctcgatgccctgctgatcaaaacccgt
gaactgcatgagccgctcaaggcccggctggaacagggtcgcgatcgcctgctggagatc
cactccagcggtggcgccgccgcccagcagctggtcgacaagctggctgccgaagatggc
gacaccggcatgatctccttcgccctcaagatgttcgacgagatcggcgtcaatcaggat
gaccgtggcgagaacgcgctggtgctgaccccgggggatcacatgctggtctccagcttc
ccgggcctgccgcaggatggtatgaccatcaccttcgatcgcccgaccgcattgtcgcgg
gatgacatggcgctgctctgctgggatcaccccatgatgcgcggcggtatcgacctgatc
ctgggctccgagatcggtgcgacctcggttgccctgctcaagaacaaggcgctgcccatc
ggttcgatcctgcttgagctgatcttcgtcgccgagtctgcggctcacccccagctctac
cgcttcatgccgccaacgccgatccgtctgctgatggacaagaatggccagaatctgggc
gagaaggtggcgttcgatgccttcaaccgccagctgaccccggtcaaccgccatcttggc
agcaagctcgtgactgcatcccagccggttattcacggtctgataggcaagggccagccg
attgccgaagagttgaaagcagtgattgtcgacaaagcccgtgcccagatggcgcagacc
ctgcagcaggatctcgatcgtctggaagcgctcaaggcggtcaatccaagcgtgcgcgac
agcgaactggattaccttcgtgatctgcaggcagaattgcaccacctgatcgaccagacc
caactcaagctggacgcaatccgctttatcgtggtcacccataactga
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