Arsenophonus endosymbiont of Aleurodicus dispersus: ARADI_0586
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Entry
ARADI_0586 CDS
T05672
Symbol
rne
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aen
Arsenophonus endosymbiont of Aleurodicus dispersus
Pathway
aen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ARADI_0586 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aen03019
]
ARADI_0586 (rne)
03009 Ribosome biogenesis [BR:
aen03009
]
ARADI_0586 (rne)
Enzymes [BR:
aen01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
ARADI_0586 (rne)
Messenger RNA biogenesis [BR:
aen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ARADI_0586 (rne)
Ribosome biogenesis [BR:
aen03009
]
Prokaryotic type
rRNA processing factors
ARADI_0586 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
VAY02463
LinkDB
All DBs
Position
I:552173..554758
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AA seq
861 aa
AA seq
DB search
MKRMLINATQQEELRVALVDGQCLYDLDIENPGHEQKKANIYKGKITRIEPSLQAAFVDY
GSEKHGFLPIKEIAQEYFPSNYQPYGRPNIKDVLKEGQEVIIQVDKEERGNKGAALTTYI
SLAGSYLVLMPNNPRAGGISRRIEGECRTEIKEALPSLEIPNGMGLIVRTAGVGKSAETL
QQDLEYRLKHWQAIKKAAETRAAPFLIHQESNVIVRAFRDYLRTDIGEILIDNAKIVEMA
HLHIEAIGRGGFTSKIKYYSGDVPLFSHYQIESQIESAFQREVRLPSGGVLVIDTTEALT
AIDINSSRSTRGGDIEETALQTNLEAADEIARQLRLRDLGGLIVIDFIDMTLVRHQREVE
NRLREAVRQDRARIQITRISRFGLLEMSRQRLSPSLGESSHHVCSRCGGTGTIRDNESLS
LSILRLIEEEALKENTHEVHAIVPVQIASYLLNEKRKSVNEIERRQHNIRVIIVPNDQME
SPHYNVIRIRKGEEISSLSYYLAQYHEAEINNLADDTTSEKKLPEQPAISTFAIQSQADT
KNAVFVNGKLSKQSKSINKQTSTRLFNRITSFLKKLFIESQRPIETNDIKLNSSNDKRRN
NNRRNNRRPTQRREQNDNIDNRQNSGYTNEYQSRKSCNQQSYCNDTQDSAVCETQQQHCE
QRAARSLRQEEKKQQQLETKTKPLDKKESETERMVVISPRRHQRQLVQVQSMSVANSMTK
QQQLPIDKEYHITNGVDAVPALTADYIWPNAESISKQKTIDVLLTAQSEYQESSANYTNK
RQERIIPRRSRRSVRHLRVSGQRRRRYRDEHQIKSLVPLKMAVASPELSSGKVWIIYPIK
LNELNKISSLVHIKLAKIDRL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaattaacgccactcaacaagaagagttgcgcgttgctcttgttgat
gggcaatgtctttatgacctagatattgaaaatcctggacacgaacaaaaaaaagcaaat
atttacaaaggcaaaattacccgtatagaacctagtctgcaagcagcatttgttgactat
ggatcagaaaaacacggttttcttccaattaaagaaattgcacaggaatattttccgagt
aattatcaaccctatggtcgcccaaacataaaagatgttttaaaagaaggccaggaagtt
attattcaagttgataaagaagaacgaggaaataaaggggcagcattaactacttatatt
agtttagcaggtagttatcttgtattaatgccaaataacccacgtgcaggtggtatatca
cgacgtattgaaggtgaatgtcgcacagaaataaaagaagcattaccatcattagaaata
cccaatggtatgggattaattgtccgtactgctggtgtaggtaaatcagcagaaactcta
caacaagatctagaatatcgtcttaaacattggcaagcaataaaaaaagcagcagaaacc
cgagcagcacctttccttattcatcaagaaagtaatgttattgtgcgtgcgtttcgtgat
tacttgcgcactgatattggtgaaatcctgattgataatgctaaaattgtcgagatggcc
caccttcatattgaagctattggtcgtggaggttttacaagtaaaattaaatactacagt
ggagatgttccactatttagccactatcaaatcgaatcacagattgaatccgcttttcag
cgtgaagttcgtttaccgtctggtggtgtattggttattgacactactgaggcattaact
gctatcgatatcaattcatcacgttcaacccgtggtggcgatatagaagaaacagctttg
caaacaaatttagaagcagctgatgaaattgctcgtcaattacggttacgggatttaggt
ggattgattgttattgattttattgatatgacacttgttagacatcaacgtgaagttgaa
aatcgcctgcgtgaagctgtacgtcaagacagagctcgtatccaaataactcgtatatcg
cgatttgggctacttgaaatgtcacgccaacgtttaagtccgtcacttggtgaatctagt
catcacgtttgttcacgttgtggcggtacaggaacaatccgtgataatgaatcactttca
ctctctattttacgtttgattgaagaagaagctttaaaagaaaatacgcatgaagtacat
gctattgtaccggtacaaattgcttcttatctactgaatgaaaaacgtaaatctgttaat
gaaattgaacggcggcaacacaatatacgtgttattattgttcctaacgatcagatggaa
tcaccgcattataatgtaatccgcattcgtaaaggtgaagaaatttcatcattaagttac
tatcttgcgcaataccacgaagctgaaataaataatttagcagatgataccactagtgag
aaaaagttacctgaacaaccagctatttctacttttgctatccaatctcaagcagatact
aaaaatgctgtgtttgttaatggcaaattaagtaaacaaagtaaatcaattaataagcaa
acttcaacaagattatttaatcgaattacctctttcttgaaaaaattatttatcgaatca
caacgaccaattgaaacaaatgatataaaattgaatagcagtaatgataagcgacgtaat
aataatcggcgtaataatcgtcggccaactcaacgtcgtgaacagaatgataatatcgat
aaccgtcaaaatagcggatataccaatgagtatcaatcgcgtaagagctgtaatcagcag
agttattgtaatgatactcaagatagtgctgtatgtgaaactcaacaacagcattgcgaa
cagcgtgctgcacgttcccttcgtcaggaagaaaaaaaacagcagcaacttgaaactaaa
acgaaaccactagataagaaagagtctgaaacagaaagaatggttgttatctctcctcgc
cgtcaccagcgccaactggttcaggttcaatctatgtcggtggcaaatagtatgactaag
caacaacaactacctattgataaagaatatcatattaccaatggtgtagatgcagtacct
gcgttaactgccgactatatttggccaaatgctgaatcaatatcgaaacaaaaaaccata
gatgtgctgctcacagcacagtctgaatatcaagaatcatccgctaattatactaataaa
cgacaagagagaattattccgcgcagatcaagaagatctgtgcgccacttacgtgttagt
gggcaacggcggcgtcgctatcgtgatgaacatcaaataaaatcattagtcccattaaaa
atggctgttgcctcgcctgaattatcttcaggtaaagtctggattatctacccaattaag
ctcaatgaattgaataaaatatcatctctagtccatataaaattagcgaaaatagatcgc
ctttaa
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