Aeromonas salmonicida O23A: O23A_p0218
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Entry
O23A_p0218 CDS
T04990
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aeo
Aeromonas salmonicida O23A
Pathway
aeo03410
Base excision repair
aeo03430
Mismatch repair
aeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
O23A_p0218
03430 Mismatch repair
O23A_p0218
03440 Homologous recombination
O23A_p0218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aeo03400
]
O23A_p0218
DNA repair and recombination proteins [BR:
aeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
O23A_p0218
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
O23A_p0218
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
O23A_p0218
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
bHLH_IRO3
Motif
Other DBs
NCBI-ProteinID:
ARW80972
LinkDB
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Position
228584..230314
Genome browser
AA seq
576 aa
AA seq
DB search
MPLQIRRRPRVDDSHLPATLHPLLRQVFASRGVEDPALLERSASQLLPPQRLFGMEQAVP
LLAAALTAQQRILIVGDFDCDGATSSALCVLALRAMGGHHIDFLVPNRFEFGYGLTPEIV
ELAVARGAEFLITVDNGISSIAGVAAAKAAGMQVLVTDHHLPGQELPAADAIVNPNQHGC
DFPSKSLAGVGVAFYLMAALNTHLRQLGWYERQGIRAPNVADYLDLVALGTVADVVALDG
NNRILVHQGLQRIRAGRCRPGIQALVDVSGRDGRRLTAADLGFALGPRLNAVGRLDDMSL
GVACLLSDDLNLARQLASEMDSLNQERKEIEQGMQQEALATLEQIRFRDGEVPSGIVLHR
DEWHQGVVGLVASKVKEKYYRPVIAFAESSETELKGSGRSIPGVHLRDALELLDTRHPGL
MGKFGGHAMAAGLTLPKANIEAFGRAFETVIGELVTPELLTGVLLTDGELLPDELSLELA
ELIRASGPWGQAFPEPLFDGEFVLVQQRLVGEKHLKMMLTTDSGHAVDAIAFGVDLKRWP
DASVKRVRLVYRLDVNEWRGNRSVQLLVEHLEAAGL
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgcaaatccgtcgtcgtccgcgagttgatgattcccatctgcccgctactttg
cacccactgcttcgtcaagtctttgccagccggggggtagaggatcctgccctgctcgag
cgcagcgccagccagctgttgccgccccagcgcctgttcggcatggagcaggcggtgccc
ctgctggcggcggcgctgaccgcccagcagcgcatcctgatcgtcggcgattttgactgc
gatggcgccaccagctcggccctgtgcgtgctggcgttgcgagcaatgggcggccaccac
atcgattttctggtgcccaaccgtttcgaattcggctatggcctgaccccggagatagtc
gagctggcggtggcacggggcgccgagttcctcatcacggtggacaacggcatctccagc
atcgccggggtggcggcggccaaggccgccggcatgcaggttctggtcaccgatcatcac
ctgccgggccaggagctgcctgctgccgatgcgatagtgaaccccaaccagcatggctgc
gacttcccctccaagtccctggccggggtgggggtggccttctatctgatggcggctctc
aacacccatctgcgccaattgggctggtatgagcgccagggcattcgtgcccccaatgtg
gcggattatctggatctggtggcgcttggcacagtcgccgacgtggtggcgctggatggc
aacaaccgcatcctggtccatcaggggttgcagcggatccgggccggtcgctgccgtccc
ggcattcaggcgctggtggacgtgtcgggccgggatggccgccgcctcaccgccgccgat
cttggctttgcgctggggccgcgcctcaatgccgtgggccggctcgatgacatgtccctc
ggggtcgcctgcctgctcagcgatgacctcaatctggcgcgtcagctcgcctccgagatg
gacagcctcaaccaggagcgcaaagagatagagcaggggatgcagcaggaggcactcgcc
accctggagcagatccgctttcgcgatggcgaggtgccttccggcatagtgctgcacaga
gacgagtggcatcagggggtagtggggctggtggcctccaaggtgaaggagaagtactac
aggccggtgatcgcgtttgccgagagcagcgagaccgagctcaagggctcaggtcgctcc
attcccggcgtgcacctgcgcgatgccctcgaactgctcgatacccgccatccgggcctg
atgggcaagtttggcggccacgccatggcggcggggctgaccctgcccaaggccaatatc
gaggcttttggccgcgccttcgagacggtgatcggcgagctggtgacccctgagctgctg
accggggtactgctcaccgatggtgaactgctgccggatgagctcagccttgagctggct
gagcttattcgcgcctccggcccctggggccaggccttccccgagcctctgtttgacggc
gaattcgtgctggtgcagcagcgactggtgggggaaaaacacctcaagatgatgctgacc
acggattcgggccatgcggtggatgccatcgccttcggggtcgacctcaagcgctggccg
gacgcctcggtgaagcgggtgcggttggtctaccggctcgacgtcaacgagtggcgtggc
aaccgcagcgtgcaactgctggtggagcatctggaagccgccggtctctag
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