Aeromonas salmonicida O23A: O23A_p0400
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Entry
O23A_p0400 CDS
T04990
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
aeo
Aeromonas salmonicida O23A
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aeo03000
]
O23A_p0400
Transcription factors [BR:
aeo03000
]
Prokaryotic type
Helix-turn-helix
Other families
O23A_p0400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
Sigma54_activ_2
GAF
AAA_lid_14
AAA_5
HTH_23
HTH_29
HTH_17
HTH_28
HTH_30
AAA_3
HTH_7
HTH_psq
HTH_22
AbiEi_4
AAA_22
Xre-like-HTH
HTH_IclR
Mg_chelatase
HTH_1
AAA_16
AAA_2
HTH_Tnp_ISL3
nSTAND6
IstB_IS21
MerR
Motif
Other DBs
NCBI-ProteinID:
ARW81152
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Position
421333..422985
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AA seq
550 aa
AA seq
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MSELPQYSSSPSPIQRSWQRCLHQGLLRQQSAELDLLPQGELSARQEAHRTLIACFQRFV
LPLFAQLLAGRPCRLLLCDGEGAILAASGDDGFARHAERIFLRSGARWGEASKGTNAIGT
ALAEQSEVQVLGNQHFFAQHSFLSCSACPLLGPDGQLLGVLDISTDAAHHDGDMLGTVRL
LAMTLENALLARQPGWLVDLDPQSLWSARLLLGEGGELLGANRAGRLWLGQHPFDGKQLL
RERRGLRLGSEPVVAPRQTAQQGAAQVPLKMLERGISLLIEGETGSGKEHLVRALHRASS
RQDKPLVCVNCGALPADLVEAELFGYVGGAFSGARSQGSQGYLRAAHGGILMLDEIGELP
LLAQTRLLRVLQDRSVTPVGSHRPEPVDFWLVSASHRDLAAMVQAGTFREDLYYRVCGWR
QQLTPLRAWPQGERQGLIRRLLSEMDPALQLTPEAEQQLLAHPLPGNVRQLKQALEVACV
LAEGLGWIEPAQLHLPAASASSQASTATLREQNLLRVQQTLAACGGNVSEAARLLGISRT
TLYRALREGP
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaccgcagtacagttccagccccagtccgatccagcgttcctggcagcgc
tgcctgcatcagggcctgctccgccagcagagcgccgagctggatctgctgccccaggga
gagttgtcggcccgccaggaggcgcacaggacgctgattgcctgcttccagcgcttcgtg
ttgccgctgtttgcccagttgctggcgggcagaccctgtcgcctgctgctgtgtgacggt
gagggggccatactggccgccagcggtgacgacggctttgcccgccacgccgagcgcatc
tttttgcgcagcggcgcccgctggggggaagcgagcaagggaaccaacgccattggtaca
gcgctcgccgagcagagcgaggtgcaggtgctcggcaatcagcatttcttcgcccagcac
agcttcctcagttgcagcgcctgccccctgctcgggccggatgggcaattgctcggggta
ctcgacatctccactgacgcggcccaccacgacggcgacatgctgggcacggttcggctc
ttggccatgacgctggaaaacgcgctgctggcgcgccagccgggctggctggtggatctc
gatccccagagtctctggtccgcccgtttgctgctgggggaggggggcgagctgctcggc
gccaaccgggccggccggctctggctcggccagcaccccttcgacggcaagcagttgctg
cgcgaacgccgtggcctgcggctggggtcagagccggttgtggcgccccggcaaacagcg
caacaaggggcggcacaggtgccgctcaagatgctggagcgcggcatctcgctgctcatc
gagggggagaccggcagcggcaaggagcacctggtgcgtgccctgcatcgggcgtcgagc
cgacaggacaagcccctggtgtgtgtcaactgtggcgccctgccggcagatctggtggag
gccgagctgtttggttatgtgggcggggccttcagtggcgcccgcagccagggcagtcag
ggttatctgcgcgccgcccacggcggcatcctgatgctggatgaaatcggcgagctgccg
ctgctggcgcagacccggctgctgcgggtgttgcaggatcgcagcgtcaccccggtcggc
agccacagacctgagccggtggatttctggctggtcagcgccagccaccgggatctggcg
gccatggtgcaggccgggacgtttcgcgaggacctctattaccgggtctgcggctggcgc
cagcagctgacaccgctgcgggcatggccacagggcgagcgccagggattgatccggcgc
ctgctctcggagatggacccggccctgcaattgacgccggaggcggagcagcaactgctg
gcccatcccttgcccggcaacgtgcgccagctcaagcaggcgctggaggtggcctgcgtg
ctggcggaagggctgggctggattgagcccgctcagctgcatctgcccgctgcatcggcc
tcgtcgcaggcgagtaccgccaccttgcgtgaacagaacctgctgcgagtgcagcagacc
ctggcggcatgcgggggcaatgtgagcgaggcggcgcgcctgctcggcatcagtcgcacc
accctctaccgggcgctgcgtgaaggaccctga
DBGET
integrated database retrieval system
