Aeromonas salmonicida O23A: O23A_p1123
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Entry
O23A_p1123 CDS
T04990
Name
(GenBank) GGDEF domain protein
KO
K18765
RNase E specificity factor CsrD
Organism
aeo
Aeromonas salmonicida O23A
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeo03019
]
O23A_p1123
Messenger RNA biogenesis [BR:
aeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
O23A_p1123
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
ARW81868
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All DBs
Position
complement(1167654..1169297)
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AA seq
547 aa
AA seq
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MLNKLGSNLLLIAAVTCAPLLLLQGIWLAAQATPLTLTLILGTSLLGFGLLFMLAYRARN
AERAQQDRVWIKALQLRDPAVLETAEAQAALQQLLSHFNEADLDAHRQIDELHNLATQDE
LTQLQNRHAFRRDMTALLQRDQDTQTATLVLIRATELGKLNAQRGFQSGDAYIKDIANLI
TRVVSRFPGHQVYRISGADFAVLVQPVANIPPPLLGRDLKIAFDHYQQQHELESAAYSGL
TRLSSGQKIEAILARADLALARAQTETVNGWAIQQDDDEVVDLQGQHHWKLVLNELLDQE
RISFTYQPIQSMHRSMLAYNEIYTRFSSADGTVLPTDTLFAMAQRLDMVMKLEQMLVVHI
MRQYRAFGANQSRWGINLSSNLLQNSTFLIWLDRQLLKDPNTSANLVFELDEEHLERNMT
GAKRVFELLRRNGSRSAICNFGKGIGSFNLFRELKPDYIKLDPALITGLEQDLTNQQFVR
MIVDVSHRMGCQVIAEGVEQLGQKQLLQGMYVDGLQGYLIARPQPLRPDISQLGLFTEDV
STSAESE
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagctcgggagtaacctgttactgatcgcagccgtcacctgtgctcctctg
ctgctgttgcaaggcatctggctcgccgcacaggcaacccctctcaccctgacactcatt
cttggcacctccctgctcggtttcggactgctgttcatgctggcctatcgcgcccgcaat
gccgaacgggcccagcaggaccgcgtctggatcaaagccctgcaactgcgtgaccctgcg
gttctggagacggcagaggcccaggctgcactgcagcagttgctttctcacttcaatgaa
gccgatcttgatgcccatcgccagatagacgagttgcacaatctggcgacccaggatgag
ctgacccagctgcaaaaccgccacgcatttcgccgcgacatgacggccctgctgcaacgg
gatcaggatacccagaccgccaccctggtgctgatccgtgccaccgagcttggcaaactc
aatgcccagcgcggctttcagtcgggggatgcctatatcaaggacatcgccaatctgatc
acccgggtggtgagccgctttcccggccatcaggtttaccgtatctcgggggccgacttc
gccgtgctggtgcagccggtggccaacataccgccccctctgctcgggcgagatctgaag
attgcctttgaccactatcaacagcagcacgagctggagagcgctgcctattcggggctg
acgcgcctgagcagcgggcagaagatagaagccatactggcgcgggccgatctggcactc
gctcgcgcccagacggagacggtcaacggctgggccatccagcaggacgatgatgaggta
gtcgacttgcagggtcagcaccactggaaactggtgctcaacgagctgctggatcaggaa
cggataagcttcacctatcaacccattcaatccatgcaccgcagcatgctggcctacaac
gagatttatacccgcttcagcagtgctgacggcactgtgctgccaacggacaccctgttt
gccatggcccagcgcctcgacatggtgatgaagctggaacagatgctggtggttcacatc
atgcgccagtaccgggcatttggcgccaaccagagccgctggggcatcaacctctccagc
aacctgttgcagaacagcacctttctgatctggctggacaggcagttgctcaaggatccc
aacaccagcgccaacctggtgttcgaactggatgaggagcatctggagcgcaacatgacg
ggggccaaacgggtgttcgagctgctcaggcgcaacggcagtcgctccgccatctgcaac
ttcggcaagggaatagggtcattcaacctgtttcgtgagctcaaacccgattacatcaag
ctggatcccgccctcatcacagggctggagcaggatctgaccaaccagcagttcgtgcgg
atgatcgtcgatgtgtcacaccgcatgggttgccaggtgatagcggaaggggttgagcaa
ctggggcagaagcaattgctgcaaggcatgtatgtagacggattgcagggctatctgatc
gccaggccgcaaccgctgcgaccggacatcagccagctagggctgtttactgaggacgtt
tcaacttcagcagagtcagaatga
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