Aeromonas salmonicida O23A: O23A_p1463
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Entry
O23A_p1463 CDS
T04990
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
aeo
Aeromonas salmonicida O23A
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeo03019
]
O23A_p1463
Enzymes [BR:
aeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O23A_p1463
Messenger RNA biogenesis [BR:
aeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
O23A_p1463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
AAA_22
nSTAND3
ResIII
AAA_23
AAA_30
HA2_N
NTPase_1
PhoH
T2SSE
NACHT
AAA_11
TsaE
AAA_25
SLFN-g3_helicase
SRP54
Motif
Other DBs
NCBI-ProteinID:
ARW82206
UniProt:
A0A1Z1NNJ8
LinkDB
All DBs
Position
complement(1530716..1534603)
Genome browser
AA seq
1295 aa
AA seq
DB search
MSLSIEALRRRLSACMNLDARRLSSRLNGIKKLPEGKQITVLETIAADLDAAQARYQSRL
AGVPKVTYPDNLPVSQKQAEIAKAISEHQVVIIAGETGSGKTTQIPKICLALGRGVKGFI
GHTQPRRLAARTVAARIAEEMESELGQYVGYKVRFTDQVSEQTHIKLMTDGILLAEIQND
RMLTQYDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPQRFSRHFNKAP
VIEVSGRTYPVDVRYRPLLEGSDDRDQLQGIFDAVQELAEEGLGDILIFMNGEREIRDTA
DALNKLGLRDTEVLPLYARLSNTEQNRVFQQHAGRRIVLATNVAETSLTVPGIRYVIDPG
TARISRYSWRTKVQRLPIEPVSQASANQRKGRCGRVADGICIRLYSEEDFNNRPAFTDPE
ILRTNLASVILQMLALGLGNMEAFPFVEPPESRHIKDGLSLLKELEAVRELPGTRDQEPK
LQLTDIGRQLSRIPLDPRLAKMVITAAQTGCLSEVMVITAGLSIQDPRERPMEKKQAADE
QHKRFEDKDSDFLAFVNLWNYLKEQQDALGSNPFRRMCQKEFLSYLRVREWQDIHLQLRQ
TVKELGFKANHEPADFKTVHCALLTGLLSHIGNKDLEKPEFLGARNGRFHIFPASGLFKK
PPKWVMAAELVETSRLYARVNAKIEPEWVEPLAAHLIKLHHSDPHWSKKNGAVMAKEKVT
LFGLTLVNERTINFSRLDPVLCRELFIRRALVEGDFETRHRFFGDNRKLLAEVEELEHKS
RRRDILVEDEDLFRFYDARLPEEVISSRHFDNWWKEAQKQDPELLNFEREMLMKGDAAHI
SDLDYPNFWQQGRLKLKLSYQFEPGEAADGVTLHIPLPLLNQVEVKGFEWLIPGLRHELL
VALIKSMPKPMRKNFVPAPNYADALLASLNPEQGPLLDEMERQLRRMTGVTVPREAWDWA
AVPDHLKLTFRVVDDRHKPIAEGKDLEALKESLRGRVQETLSQVADDDIEQSGLTLWSFG
ELPQEYSQKRGGFEVKAYPALVDEKDSVSIQLVESAVAQQQLMWAGQRRLVLLNVPSPIK
YLQEKLPNKAKLGLYFNPFGKVAELIDDCIACGCDKLIAQHGGLAWDEAGFDALKEFVRA
ELNDAVVEVASQVEAVLTLSHEIKKRLKGKMQLDTAFAMSDIQLQLGNLIHKGFVTETGW
QRLPDLLRYLRAIERRMEKLAIDPNRDRVYMLKVQSVEAEYKALLAKIPKSQLIPTEVAN
IRWMIEELRVSFFAQNLGTPYPVSDKRVLNAIAQC
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
ttgtctctctctatcgaggcgctgcgccgccgtctatcagcctgcatgaaccttgatgcc
cgtcgtctttccagtcgtctgaacgggatcaagaagctgcccgagggcaagcagatcaca
gtgctggagaccattgccgccgatctggacgcagcgcaggcgcgttatcagtcccgtctg
gccggtgtccccaaggtcacgtatccggacaacttgcctgtcagccagaagcaggcagag
atcgccaaggcgatcagtgagcatcaggtggtgatcatcgccggtgaaaccggctcgggc
aaaacgacccagatccccaagatctgcctggcgctggggcgcggggtgaagggctttatc
ggccacacccagccgcgccgtctggctgcccgtactgtggctgcccgtatcgcagaggag
atggagtcagaactcggccagtacgtgggttacaaggtgcgctttaccgatcaggtgagc
gagcagacccacatcaagctgatgacagacggtatcttgctggcggagatccagaatgac
cgtatgttgacccagtacgacaccatcatcatcgatgaggcccatgagcgcagcctcaac
atcgacttcattctgggttatctcaagcagctgctgccaaggcgccccgacctcaaggtg
atcatcacctcggccaccatagatccccagcgcttctcccgccatttcaacaaggcgccg
gtgatcgaggtctccggccgcacttatcccgtcgatgtgcgctatcggccgctgctggaa
gggagtgacgatcgcgaccagttgcagggtatcttcgatgcggtgcaggagctggccgag
gaagggctgggggacattctcatcttcatgaacggcgagcgggagatccgcgataccgcc
gatgccttgaacaaactgggcctgcgagataccgaagtgctgccgctctatgcgcgcctc
tccaacacagagcagaaccgggtgttccagcaacacgccgggcggcgcatcgtgctcgcc
accaacgtggcggaaacctctctcacagtgccgggcatccgttatgtgatagacccgggc
actgcccgcatcagtcgctactcctggcgtaccaaggtgcagcgcctgcccatagagccg
gtctcccaggccagtgccaaccagcgcaaagggcgttgtggccgggtggcggacggtatc
tgtatacgcctctactccgaggaggatttcaacaatcgtcccgcttttaccgatcccgag
atcctgcgtaccaacctggcttccgtcattttgcagatgctggcgctggggcttggcaac
atggaggccttccccttcgtcgagccgcccgagtcgcgccacatcaaggatggcctgagc
ctgctcaaggagctggaggcagtaagagagctgcctggcacccgggatcaggaacccaaa
ctgcagttgaccgacataggtcgtcagctgtcgcgcattccccttgatccccgtttggcg
aagatggtgatcacggcggcgcaaaccggttgcctgagcgaggtcatggtgatcaccgcc
ggcctcagcatccaggatccccgcgagcggcccatggagaagaagcaggccgccgacgag
caacacaaacgctttgaagacaaggattctgacttccttgccttcgtcaatctgtggaat
tacctcaaagagcagcaggatgcactgggcagcaacccgttccgtcgcatgtgccagaag
gagttcctctcctacctgcgagtgcgcgagtggcaggatattcacttacagttacgccag
acggtgaaagagctgggctttaaagctaatcatgaaccggcggatttcaagacggtgcat
tgcgccttgctgaccggcctcctgagccatatcggcaacaaggatctggagaagcccgag
tttctcggcgcccgcaacggccgcttccacattttcccggcctcgggtctgttcaagaaa
ccgcccaagtgggtgatggccgccgaactggtggaaacctcccgcctctatgcccgggtc
aatgccaagattgaacccgagtgggtggagccgctggcggctcacctcatcaagctgcac
cacagcgatccccactggtcgaagaagaatggcgccgtcatggccaaggagaaagtgacc
ctgtttggtctgacgctggtcaatgagcgcaccatcaacttcagtcgcctcgatcctgtg
ctgtgtcgagagctctttatccgccgtgccctggtggagggggatttcgagacccgtcac
cgcttctttggcgacaaccgcaagcttctggccgaggtggaggagctggagcataagtcc
cgccgtcgcgacattctggtggaggatgaggacttgttccgcttctacgacgcccgtttg
ccggaagaggtgatatcaagtcgccacttcgacaactggtggaaagaggcgcaaaagcag
gacccagagctgctcaacttcgagcgggagatgctgatgaagggggatgctgcccacatc
agtgatcttgactatcccaacttctggcagcagggacggctcaaacttaaattgagctac
cagtttgaaccgggggaggcggccgatggcgtcaccctgcatattccgttgccgctgctc
aatcaggtagaggtaaaggggttcgagtggctgatccccgggctgcgccatgagttgctg
gtggcgctgataaaatccatgccaaaaccgatgcgcaagaatttcgtaccggcccccaac
tacgccgatgcgctgctcgccagcctcaaccccgagcagggaccgctcctcgatgagatg
gagcgtcaactgcggcgcatgacgggggtgactgtgccccgcgaagcgtgggattgggct
gctgtgcccgatcacctgaaactcaccttccgggtggtggacgataggcacaagcctatt
gcggaaggcaaggatctggaggcgctgaaagaatccttgcgtgggcgtgtgcaggagacg
ttgtcccaggtggcggacgacgacatagagcagtcaggtctgacgctgtggagctttggc
gaattgccgcaggaatacagccagaagcgcggcggcttcgaggtgaaggcttatccggcc
ttggtggatgagaaggactctgtctccatccagctggtggagagcgctgtggcccagcag
cagctgatgtgggctggccagcgccgactggtgctgctcaacgtgccatctcccatcaag
tatctgcaggagaagctgcccaacaaggccaagttgggactctacttcaacccctttggc
aaggtggcagagcttatcgatgactgcattgcctgcggctgcgacaagctcattgcacag
catggcggcctggcctgggatgaggccggtttcgacgcgctcaaggaatttgtgcgcgcc
gagctcaacgatgccgtggtggaagtggccagccaggtggaagccgtactgacgctttct
cacgaaatcaagaagcggctcaagggcaagatgcagctcgacaccgcctttgccatgtcg
gatatccagcttcagctgggcaacctcattcacaaggggttcgtgaccgagaccggctgg
cagcggctgccggacttgttgcgctacctgcgagccatcgagcgccggatggaaaagctg
gccatcgatcccaaccgggatcgggtttacatgctcaaggtgcagagcgttgaagccgag
tacaaggctctcttggccaagatccccaaatcccagttgatcccgaccgaagtggccaat
atccgctggatgatcgaggagttgcgggtctccttcttcgcccagaatctggggaccccc
tatccggtgtcagataaacgggtgctcaacgccatcgcccagtgctaa
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