Aeromonas salmonicida O23A: O23A_p1474
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Entry
O23A_p1474 CDS
T04990
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aeo
Aeromonas salmonicida O23A
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aeo03016
]
O23A_p1474
Enzymes [BR:
aeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
O23A_p1474
Transfer RNA biogenesis [BR:
aeo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
O23A_p1474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ARW82217
LinkDB
All DBs
Position
complement(1545477..1546589)
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AA seq
370 aa
AA seq
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MHYQLITQQAELEQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGEHLALLDPLTLD
LAPLWQRLGRAGQIAILHASGEDLELIQHEAGHLPNQMHDTQLATAFLGYGVSVGFGALA
KEFLGVDLVKDQARTDWLARPLTERQLEYAAADVLYLMPLYEKVMAKLHESGKFAWFEQE
CQNHSARKTQGNDPQQAYLEIINAWQLGRRELAILRELAAWRQQEAVRRDLALNFVVKEL
HLFKVAERRPASLRDLNELGLAPIEIKIHGKRMLDIVAQAQRSEPDSWPEPIRRLVDYPQ
YKAELKRIKGMVEEKAKACNIPPELVASKKIIHQYFTWSWRMSDEERARSDKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcactatcaacttatcactcagcaagccgaactggagcagtatctcgcctccctggcc
gacgttcccctggccatcgatactgaattcgttcgtacccgcacctattacccccagctg
ggtctgttccagatctatgatggtgagcatctggcgttgctggatccactcaccctggat
ctcgcccccctttggcaacggctcggtcgggcagggcagatcgccatactgcacgcttcc
ggcgaagaccttgagctgatccagcatgaagccggtcacctgcccaatcagatgcacgac
acccagctggcaacggccttcctgggctatggtgtctctgtgggttttggtgcgctggcc
aaggagtttctcggggtggatctggtcaaggatcaggcgcgtaccgactggctcgctcgc
ccgctcaccgaacgtcaactcgaatacgcagccgccgatgtgctctacctgatgcccctc
tacgagaaggtgatggccaaactgcacgaaagcggcaaattcgcctggttcgagcaggag
tgccagaaccactcggctcgcaagactcagggcaacgatccccagcaggcctatctcgag
attatcaacgcctggcaactggggcgccgcgaactggcaatactgcgcgagctggctgcc
tggcgtcagcaggaagcggtgcgccgggatctggctctcaatttcgtggtcaaggagctg
cacctgttcaaggtggccgagcgtcgtccggcctccctgcgcgacctcaacgaattgggt
ctggcacccatcgaaatcaagatccatggcaagcggatgctggacatagtggcccaggcc
cagcgcagcgagccggatagctggcccgagccgatccgccgactggtggattatccccag
tacaaggctgaactcaagcgcatcaaggggatggtggaagagaaggccaaggcctgcaat
attccgcctgaactggtggcgagcaagaagatcattcaccagtacttcacctggagctgg
cgtatgagcgatgaagagcgcgcccgcagcgacaagcccatgttgctgcaagggtggcgt
catgagctggtgggtcatttgctggcccaataa
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