Aeromonas salmonicida O23A: O23A_p1582
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Entry
O23A_p1582 CDS
T04990
Name
(GenBank) ATP-dependent DNA helicase RecS
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aeo
Aeromonas salmonicida O23A
Pathway
aeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O23A_p1582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeo03019
]
O23A_p1582
03400 DNA repair and recombination proteins [BR:
aeo03400
]
O23A_p1582
Enzymes [BR:
aeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O23A_p1582
Messenger RNA biogenesis [BR:
aeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O23A_p1582
DNA repair and recombination proteins [BR:
aeo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O23A_p1582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
TniB
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
ARW82325
LinkDB
All DBs
Position
1658632..1660557
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AA seq
641 aa
AA seq
DB search
MISSLLTRHFGFDQLRPGQEAVISRLLAGQSAAAIFPTGSGKSLCYQLPALALPHLTLVI
SPLIALMHDQLAFLHSKGIAAATLDSSQTPEESRRVMQQASDGQLKILMISVERLKNERF
RRFIQQVPLSMLVVDEAHCISEWGHNFRPDYLKLPAYRRELKIPQVLLLTATATPAVMAD
MQAKFDIEDEGLVVTGFYRANLDLAVVPLPAEARDDWLQAEIRREPTAPTIVYVTLQHTA
QHCADLLQRAGIRASAYHAGLDSTLRSQIQHDFMAGKVDCIVATIAFGMGIDKADIRRVI
HYDLPKSIENYSQEIGRAGRDGHPSRCIVLANRAQLPVLENFVYGDTPDRAAIVTLLEIL
SQSGSEWEFGLLRLSNDTNIRQLPLKTLLVYLEMAGIIMPAYSYFAEYRFKFVLDKAETL
TRFNPDRRQFLEQLFACAPQARSWCTMDFDALWQGYQGERHRAAAALDYLQQQGWIELES
KQMTDVYRVLRQDVDINALADELYALFEKKELSELARLQALLAFFTSSHCLSQELARYFA
DEQAPSKCGHCSVCRGEVAVLPTLPTLTLPNENGLRAWCDPLIALCHTRHPRILTRFLCG
IATPLTTRVKAKSLAGFGQLAAHPFAEVLAAVSRFYPTHNN
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgatctcatccctgttgacccgccacttcggcttcgaccagttaaggcccggtcaggag
gcggtgatcagccggttgctggcaggccagagtgcggctgccatcttccccaccggctcc
ggcaaatccctctgttatcagctgcctgccctcgccctgccccatctgaccctggtgatt
tcccccctgatcgcgctgatgcacgaccagctcgccttcttgcacagcaaggggatcgcc
gcagctaccctggattcgagccagacaccggaggagagtcgtcgcgtgatgcagcaggcc
agtgacggtcagctcaagatcctgatgatctcggtggagcggctcaagaacgagcgcttt
cgccgcttcatccagcaagtgccgctgtcgatgctggtggtggatgaagcgcactgcatc
tcggagtggggccacaactttcgacccgactacctcaagctgcccgcttatcgccgcgag
ctgaagatacctcaggtactgttgctgaccgcgaccgccaccccggctgtcatggccgac
atgcaggccaaattcgacatcgaggatgagggactggtcgtcaccggtttttatcgcgcc
aacctggatctggcggtcgtgccgctgcccgccgaggcgcgtgatgactggctgcaagca
gaaatacgacgagagcctacggcccccaccatcgtctatgtcaccttgcaacacacggcg
cagcattgtgccgacctgctgcaacgggcagggatcagggcaagtgcctatcacgccggg
ctcgactcgaccttgcgcagccagatccagcatgacttcatggctggcaaggtggactgc
attgtcgccaccatcgcctttggtatggggatcgacaaggcggacattcgccgggtcatc
cactatgacttgcccaaatccatcgaaaactacagtcaggaaattggccgtgccggtcgg
gatggacacccttcccgctgcatagtgctggccaatcgcgcacagctccccgtgctggaa
aacttcgtgtacggggatacgcccgatcgcgccgccatagtgacgctgctcgagatcctg
tcgcaaagtggcagcgagtgggagtttggtctgctgcgtctctccaacgacaccaacata
cgccagttgccgctcaagactctgctggtctatctggaaatggcgggcatcataatgcca
gcctacagctacttcgccgaatatcgcttcaagttcgtgctggacaaggccgagaccctg
acccgtttcaaccccgatcgacgccagtttctggagcagctgtttgcctgtgcaccgcag
gcgcgcagctggtgcaccatggacttcgatgccctctggcagggttatcagggggaacgg
caccgtgcggcagcagccctggattatctgcaacaacagggctggatagagctggaaagc
aagcagatgaccgatgtttatcgggtgctgcgtcaagatgttgatatcaatgcactggca
gacgagctctatgccctgttcgagaagaaggagctgagtgaactggcccggctacaggcc
ttgctggccttttttacatcaagccactgcctgagtcaggaactggcccgatattttgcc
gacgagcaggcacccagcaaatgcgggcactgctccgtctgccgtggcgaggttgctgta
ctgccgacattgccaaccctcaccctgcccaacgaaaacgggttgcgtgcctggtgcgat
cccctgatagccttgtgccacacccgccatcctcgcattctgacccgttttctgtgcggt
atcgccacgccattgaccacccgggtcaaggcaaaaagcctggctggatttggccagctg
gcggcgcaccccttcgcggaggtgctggcagcggtatcacggttctaccccacccataac
aactga
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