KEGG   Aeromonas salmonicida O23A: O23A_p3149
Entry
O23A_p3149        CDS       T04990                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
aeo  Aeromonas salmonicida O23A
Pathway
aeo02024  Quorum sensing
aeo03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aeo00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    O23A_p3149
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    O23A_p3149
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aeo03019]
    O23A_p3149
   03036 Chromosome and associated proteins [BR:aeo03036]
    O23A_p3149
Messenger RNA biogenesis [BR:aeo03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     O23A_p3149
Chromosome and associated proteins [BR:aeo03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    O23A_p3149
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Iec3-like_M
Other DBs
NCBI-ProteinID: ARW83888
UniProt: A0AAP3XP42
LinkDB
Position
3341720..3342079
AA seq 119 aa
MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIKLEGTISGFDQYSVLLT
DAHGNQQLVYKAKISTIAMHSGRPQVSIQRARKPRVSMAPRPHGAPSRYDDNQGGSSEQ
NT seq 360 nt   +upstreamnt  +downstreamnt
atgacaactgaatccccaagctactccacgattgagcaagccttctccctcgggaacggg
caagattctgccctcaactggttgcgtaaaaatcgcagtcaggtcgccatcttcctggtg
agcggcatcaagctggaaggaaccatcagcggcttcgaccagtacagcgtactgttgacc
gatgcccatggtaaccagcagctggtctacaaggccaagatctccaccatcgccatgcat
tccggccgtccccaggtcagcatacagcgcgcccgcaagccacgcgtctccatggcgccg
cgcccccacggagccccgagtcgttacgacgacaatcagggcggcagcagcgagcagtaa

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