Aeromonas salmonicida O23A: O23A_p3149
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Entry
O23A_p3149 CDS
T04990
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
aeo
Aeromonas salmonicida O23A
Pathway
aeo02024
Quorum sensing
aeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O23A_p3149
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
O23A_p3149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeo03019
]
O23A_p3149
03036 Chromosome and associated proteins [BR:
aeo03036
]
O23A_p3149
Messenger RNA biogenesis [BR:
aeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
O23A_p3149
Chromosome and associated proteins [BR:
aeo03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
O23A_p3149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Iec3-like_M
Motif
Other DBs
NCBI-ProteinID:
ARW83888
UniProt:
A0AAP3XP42
LinkDB
All DBs
Position
3341720..3342079
Genome browser
AA seq
119 aa
AA seq
DB search
MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIKLEGTISGFDQYSVLLT
DAHGNQQLVYKAKISTIAMHSGRPQVSIQRARKPRVSMAPRPHGAPSRYDDNQGGSSEQ
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaatccccaagctactccacgattgagcaagccttctccctcgggaacggg
caagattctgccctcaactggttgcgtaaaaatcgcagtcaggtcgccatcttcctggtg
agcggcatcaagctggaaggaaccatcagcggcttcgaccagtacagcgtactgttgacc
gatgcccatggtaaccagcagctggtctacaaggccaagatctccaccatcgccatgcat
tccggccgtccccaggtcagcatacagcgcgcccgcaagccacgcgtctccatggcgccg
cgcccccacggagccccgagtcgttacgacgacaatcagggcggcagcagcgagcagtaa
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