Aeromonas salmonicida O23A: O23A_p3370
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Entry
O23A_p3370 CDS
T04990
Name
(GenBank) DNA-directed RNA polymerase
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aeo
Aeromonas salmonicida O23A
Pathway
aeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
O23A_p3370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aeo03021
]
O23A_p3370
03400 DNA repair and recombination proteins [BR:
aeo03400
]
O23A_p3370
Enzymes [BR:
aeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
O23A_p3370
Transcription machinery [BR:
aeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
O23A_p3370
DNA repair and recombination proteins [BR:
aeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
O23A_p3370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
ARW84109
UniProt:
A0A091AAZ7
LinkDB
All DBs
Position
complement(3580948..3581937)
Genome browser
AA seq
329 aa
AA seq
DB search
MLGSVTDFLKPRLVDIEQVSPTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEILLNLKGIAVKLEGKDEVTLSLTKSGTGPVTAGDITHGDE
VEIVNPEHVICHLTGANAEISMRLKVQRGRGYVPASARVHNDDEERPIGRLLLDSAFSPI
VRIAYNVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLEAFVDLRDVSVP
EKKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgctgggttctgtaacagattttcttaaaccgcggctagttgacatcgagcaagttagc
ccgactcatgcgaaagtgactcttgagccacttgagcgtggttttggtcacacgctgggt
aatgccctgcgtcgtattttgctgtcatctatgcccggttgtgcagttactgaagtcgaa
attgacggggtactgcatgagtacagcagcaaagaaggtgtgcaggaagacattcttgaa
attctgctcaacctgaaaggtatcgctgtgaagctggaaggcaaggacgaggtaactctg
tccctgaccaagtctggaacaggccccgttaccgctggtgatatcactcacggtgatgaa
gtcgagatcgtaaacccggagcacgtaatctgccacctgaccggtgccaatgctgaaata
agcatgcgcctgaaagttcagcgcggtcgtggttatgtgcctgcttctgctcgtgttcac
aacgatgatgaagagcgtccgattggtcgcctgctgctggactccgcgttcagccccatc
gttcgtattgcctacaatgttgaggcagcacgtgtggaacagcgtaccgacttggacaag
ctggtcatcgacatggagaccaatggtactctggatcctgaagaagccatccgtcgttct
gccactattctggccgagcaactggaagccttcgtggatctgcgcgatgtcagcgtgccc
gagaagaaagaagagaaacccgagtttgatccgattctgctacgtcctgtcgatgatttg
gagctgacagttcgttctgcgaactgtctgaaggcagaagctatccactatattggtgat
ctggtacagcgtaccgaagttgagttgcttaaaactcctaacctcggtaagaagtccctg
actgagatcaaggatgtgttggcctcccgtggtctgtctcttggcatgcgccttgagaac
tggccgcccgccagcatcgctgacgagtaa
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