Aeromonas salmonicida O23A: O23A_p3704
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Entry
O23A_p3704 CDS
T04990
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aeo
Aeromonas salmonicida O23A
Pathway
aeo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O23A_p3704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aeo03019
]
O23A_p3704
Enzymes [BR:
aeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
O23A_p3704
Messenger RNA biogenesis [BR:
aeo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O23A_p3704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ARW84443
UniProt:
A0A0W0AI84
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All DBs
Position
complement(3931506..3932795)
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AA seq
429 aa
AA seq
DB search
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
IAFLAATFNYLLTHPLSNPRLVNQPRAIIMAPTRELAVQIYNDADTISASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGIRIQEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
DFTKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVVRNRQPVNRNMRDRQGGGNSN
NRRRPPRKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacgaccgaaaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacgcccatccaggcgctgtctctg
ccactgctggtagaaggtcatgacctcgccggtcaggctcagacagggaccggcaagacc
attgccttcctggccgcgacattcaactatttgctgacccacccgctgagcaatccccgt
ctggttaaccaacccagagccatcataatggcgcccacccgggaactggcagtgcagatc
tacaacgatgccgataccatttccgcatccaccggcctgaaactcggcctcgcctacggt
ggcgaaggttacgacaagcagctggccgtgctggagcagggcgtcgacatcctgatcggc
accacgggtcgcatcatcgactacttcaagtccaaggtgatcgatctgagcaatattcag
gtcgtggtgctggatgaagcggatcgcatgttcgatctgggtttcatcaaggacatccgc
ttcctgttccgccgcatgcctgccccgaccgagcgtctgagcatgctgttctccgccacc
ctctccctgcgggtgcaggagctggcctacgaacacatgaaccacccggaacatgtgcag
atagagccggagcagatgaccggcatccgcattcaggaggagctgttctacccctccaac
gaagacaagatgctgctgttgctctccctgatggaagaagagtggccggaaaaagccatc
gtcttcgctaacaccaagcatgtctgtgaagacgtgcatgcgtggctggagaatgacggt
caccgcgtcggtctgctgaccggtgacgtgccgcagaagaagcggatgaagatcctggaa
gacttcaccaagggaaccctggatatactggtcgctaccgacgtggctgcccgtggtctg
cacatcccggacgtgacccacgtcttcaactacgacctgcccgacgatgccgaagactat
gtacaccgtatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatcgaggagtacatccaccacccgatcccg
gtcagcaaatatgaccgtgaagcgctgctggatgacgtgactgccccgaaacgggtcgtt
cgcaaccgtcagccggtgaaccgcaacatgcgggatcgccagggcggtggcaacagcaac
aaccgtcgtcgtccgccacgcaagagctga
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