Aeromonas salmonicida O23A: O23A_p3990 Help Entry O23A_p3990        CDS       T04990                                  Name (GenBank) DNA-directed RNA polymerase   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism aeo  Aeromonas salmonicida O23A Pathway aeo03020   RNA polymerase Brite KEGG Orthology (KO) [BR:aeo00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     O23A_p3990  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:aeo03021]     O23A_p3990    03400 DNA repair and recombination proteins [BR:aeo03400]     O23A_p3990 Enzymes [BR:aeo01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      O23A_p3990 Transcription machinery [BR:aeo03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      O23A_p3990 DNA repair and recombination proteins [BR:aeo03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       O23A_p3990 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Apocytochr_F_C Peptidase_M23 Motif Other DBs NCBI-ProteinID:  ARW84727 UniProt:  A0AAP3XNF4 LinkDB All DBs Position 4235844..4240148 Genome browser AA seq 1434 aa AA seqDB search MKDLLKFLKAQTKTEEFDSIKIGLASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSL PSRIGLLLDMTLRDIERVLYFESYVVIEPGMTNLERSQMLSEENYLDALEEWGDEFDAKM GAEAILALLRAIDLEGEVKTMREELDQTNSETKRKKTTKRLKLMEAFLQSGNKPEWMIMT VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT LRLHQCGLPKKMALELFKPFIYGKLESRGLATTIKAAKKMVEREEAVVWDILDEVIREHP VLLNRAPTLHRLGIQAFEPTLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPASGEPIIVPSQDVVLGLYYMTRARINAKGEGMVLAGPKEAEKVYRAG LADLHARVKVRITEYLRQADDSLVERTELKNTTVGRAILSLILPKGMEYALIDEPKVLTA AEQADLDANPQNWIKSVSNKALGKKLISRLLNTCYRKQGLKDTVIFADQLMYTGFHYAAL SGASVGIDDMVIPDAKKDIIAAAEAEVAEIQDQFLSGLVTAGERYNKVIDIWASANERVS KAMMENLSKERDVNSLGEEEEQASFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSI IETPIVANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDMVITEDDC GTVEGLWMTPLIEGGDVVEPLRERVLGRVVADDVIKPGTEDEILVARNTLLDEQLCDLLE RNSVDRVKVRSAITCETDFGNCAHCYGRDLARGHLVNKGEAVGVIAAQSIGEPGTQLTMR TFHIGGAASRAAAESSIQVKNTGSIKLQNAKFVHNSDDKLVITSRSTELTIMDDMGRTKE SHKLPYGSVLEVKDGQAVSAGDTVANWDPHTHPIITEVAGRLQFEHMIDGVTITRQTDEL TGLSSIVVLDVNERPSAGKEMRPTVKLVDQNGKDVMIPGTDVAAQYFLPGKAIVNLEDGA NVGVGDAVARIPQESSGTKDITGGLPRVADLFEARQPKEPAILAEISGTISFGKETKGKR RLVITPTDGGDVYEEMIPKWRNLNVFEGEKVEKGEVLADGPESAHDILRLRGISPVANYI ANEVQDVYRLQGVKINDKHIEVIVRQMLRKCEILSAGDTDLIEGEQVEVARVKIANRKLV AEGKTPATFRHILMGITKASLSTESFISAASFQETTRVLTEAAVGGKRDELRGLKENVIV GRLIPAGTGFAYHHARINQRAAAARAVGVPQVTADEAQQNLADLLNASGSFDEE NT seq 4305 nt NT seq  +upstreamnt  +downstreamnt gtgaaagacttactcaagtttttgaaggctcagaccaagaccgaagagtttgacagtatt aagatcggtctggcctctcctgacatgatccgctcctggtcattcggtgaggtcaaaaag cctgagaccatcaactaccggactttcaagccggaacgtgatggtctgttctgtgcccgt atcttcggaccggtgaaggactacgagtgtctgtgcggcaagtacaagcgcctgaaacac cgtggtgtgatctgcgagaagtgtggcgtagaagtgacccagaccaaggtccgtcgcgag cgtatgggccatatcgagctggccagcccgactgcccacatctggttcctgaagtccctg ccgtcccgtatcggtctgctgctggacatgaccctgcgtgacatcgagcgcgtgctgtat ttcgaatcctatgtagtgatcgaacccggcatgaccaacctcgagcgcagccagatgctc tccgaagagaactatctggacgcactggaagagtggggcgacgaatttgacgccaagatg ggtgccgaagcaatccttgcattgctgcgtgccatcgatctggaaggtgaagtcaagacc atgcgtgaggagctggatcagaccaactccgaaaccaagcgcaagaagaccaccaagcgt ctgaagctgatggaagccttcctgcagtccggcaacaagccggagtggatgatcatgaca gtgctgcctgtgttgccgccggacctgcgtccgctggtaccgctggacggcggccgtttc gcgacttccgatctgaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgcttgaag cgtctgctggacctggctgcaccggacatcatagtgcgcaacgaaaagcgcatgctgcaa gagtccgtggatgccctgctggacaacggccgtcgtggtcgtgccatcacaggttccaac aagcgtccgctgaaatccttggccgatatgatcaagggtaagcaaggtcgtttccgtcaa aacctgctgggcaagcgcgtcgactactctggtcgttccgttatcaccgtaggtccgacc ctgcgtctgcatcagtgcggtctgccgaagaagatggcgctggaactgttcaagccgttc atctatggcaagctggaatcccgcggtctggcgaccactatcaaggccgccaagaagatg gtggagcgtgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg gttctgctgaaccgtgcaccgaccctgcaccgtctgggtatccaggcgtttgaaccgacc ctgatcgaaggcaaggccatccagctgcacccactcgtttgtgccgcctataacgcggac ttcgatggtgaccagatggcggtccacgtaccgctgaccctggaagcccagctggaagcg cgtgcgctgatgatgtctaccaacaacatcctgtcgcctgcctccggtgagccgatcatt gttccttcccaggacgtggtcttgggtctgtactacatgacccgtgcccgtatcaacgcc aagggcgaaggtatggtgctggccggcccgaaagaggccgagaaggtatatcgcgccggt ctggccgatctgcatgctcgcgtcaaagtacgtatcaccgaatatctccgtcaggcagat gattcgctggtagagcgtaccgagctgaagaacaccactgttggtcgtgcgatcctgagc ctgatcctgccgaaaggcatggaatatgccctgatcgatgagcccaaggtgctgactgcc gcagagcaggccgatctggatgccaatccgcagaactggatcaagagtgtttccaacaag gcgttgggtaaaaagctcatttcccgtctgctgaacacctgctatcgcaagcagggcctg aaggacaccgtcatcttcgctgaccagctgatgtataccggtttccattatgcggccctg tctggtgcttctgttggtatcgatgacatggtcatcccggatgccaagaaagacatcatc gcggctgccgaagccgaagttgccgagatccaggaccagttcctgtctggtctggtaacc gctggcgaacgctacaacaaggttatcgatatctgggccagcgccaacgagcgcgtctcc aaggccatgatggagaacttgtccaaagagcgtgatgtcaactctctgggtgaagaagaa gagcaagcctcgttcaacagcatctttatgatggccgactctggtgcgcggggttccgca gcccagatccgtcagctggccggtatgcgtggcctgatggccaagccggatggctccatc atcgagacccctatcgtggctaacttccgcgaaggtctgaacgtactgcagtactttatc tctactcacggtgcccgtaagggtctggcggataccgcactgaagacggctaactccggt tacctgactcgtcgtctggttgacgtggcacaagacatggtgatcaccgaggacgattgc ggcactgttgaaggtctgtggatgactccgctgatcgaaggtggtgacgtggtcgagccg ctgcgtgagcgcgtgctgggccgtgtggttgccgatgacgtgatcaagccgggtactgaa gacgaaattctggtagcgcgcaacacactgctcgacgagcagctgtgtgacctgctggag cgcaactccgttgaccgtgtgaaggtacgttctgccatcacttgtgaaactgacttcggt aactgtgctcactgctacggccgtgatctggcccgtggtcacctggttaacaagggtgag gctgtcggtgttatcgccgcccagtccatcggtgaaccgggtacccagctgaccatgcgt actttccacatcggtggtgccgcatcccgagctgctgccgagagcagcatccaggtcaag aacacaggtagcatcaagctgcagaacgccaagttcgttcacaacagcgatgacaaactg gttatcacttcccgttctaccgaactgaccatcatggatgacatgggccgtaccaaggaa agccacaagctgccttacggttccgtgctggaagtgaaagatggccaggccgtgagcgcc ggtgacacagttgccaactgggatccgcacactcacccgatcatcactgaagtggcgggt cgcctccagttcgagcacatgatcgatggcgtgaccatcactcgtcagaccgacgaactg accggtctctcctctatcgtcgtgctggatgtcaacgaacgtccgagcgccggtaaagag atgcgtccgaccgtgaagctggtcgaccagaacggcaaggatgtcatgatcccgggtacc gacgttgccgcccagtacttcctgccgggcaaggcgatcgtgaacctggaagatggtgcc aacgtgggcgtgggtgacgcggtcgcgcgtatcccgcaagagtccagtggtaccaaggac atcaccggtggtctgccgcgcgttgcggatctgttcgaagcacgtcaaccgaaggaaccg gctatcctggccgagatctccggtaccatctccttcgggaaagagaccaagggcaaacgc cgtctggtcatcaccccgactgatggtggcgacgtctacgaggagatgattccgaagtgg cgtaacctgaacgtgttcgaaggtgaaaaagttgagaagggtgaagtgctggcagacggt cctgaatctgctcacgacatcctgcgtctgcgtggtatcagcccggtcgccaactacatc gccaacgaagtgcaggacgtttaccgtctgcaaggcgttaagatcaacgacaagcacatc gaagtcatcgttcgtcagatgctgcgcaagtgcgagatcctgagcgctggcgacactgac cttatcgaaggcgagcaggttgaagtggctcgcgtgaagattgccaaccgtaagctggtt gccgagggtaagactccggccaccttccgtcatatcctgatgggtattaccaaggcatcc ctgagcacagagtccttcatctccgcggcttccttccaggaaaccactcgtgttctgacc gaagcggccgttggcggcaagcgtgatgaactgcgtggcctgaaagagaacgtgatcgtg ggtcgtctgatcccggctggtaccggctttgcctaccaccatgcccggatcaaccagcgt gccgccgcagcccgtgctgtcggtgtgccgcaggtgactgccgacgaagctcagcaaaat ctggcggatctgctcaacgcatccggcagttttgacgaagagtaa

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