Aeromonas salmonicida O23A: O23A_p4202
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Entry
O23A_p4202 CDS
T04990
Name
(GenBank) ATP-dependent 23S rRNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aeo
Aeromonas salmonicida O23A
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aeo03009
]
O23A_p4202
Enzymes [BR:
aeo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
O23A_p4202
Ribosome biogenesis [BR:
aeo03009
]
Prokaryotic type
rRNA helicases
O23A_p4202
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ARW84939
UniProt:
A0AAX3VSN6
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All DBs
Position
complement(4460568..4461947)
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AA seq
459 aa
AA seq
DB search
MNNTEFSSLNLSPALQENLTSLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFAL
GLLAKLNVNRLEVQALVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTQTAPQSATL
SFGAHIAVGTPGRILKHLEQGTLELSGLKTLVLDEADRMLDMGFGEEINRVISYAPEQRQ
TLLFSATYPEGIAQMSRGVQRNPVEVSVESLHEGSAIEQKLYEVPAGQRLDALTWLLSHY
QPASCVVFCNTKRACNDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATD
VAARGLDIKELGAVINYELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNLIEEY
QQAPMPQGDLAEIGREIKPIAPQMVTLSIDAGRKTKVRAGDILGALTGEGGIAGADVGKI
QISEQYSYVAVKRSVGSAALKRLQEGKIKGRTYRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacaccgaatttagcagcctcaatctctcccccgccctgcaagagaacctcacc
agcctgggttatctgcagatgaccccgatccaggcccagagcctgcccctggtgctcgac
ggcaaagacctgatcgccaaggcaaaaaccggcagcggcaagacagcggccttcgccctc
ggcctgctcgccaagctcaacgtcaaccgcctcgaagtgcaggcgctggtactctgtccg
acccgcgagctggcggatcaggtagcccaggagatacgtcgtctggcccgcgccctgccc
aacgtcaagctggtcaccctgtgcggcggtacccagactgccccccagtctgccaccctg
agctttggtgcccacatcgccgtcggcaccccgggtcgcattctcaaacacctggagcag
ggcactctcgaactctccggcctcaaaacgctggtgctggatgaagcggatcgcatgctg
gacatgggttttggcgaagagatcaaccgggtcatcagctatgcacccgagcagcgccag
actctgctcttctccgccacctatccggaggggatcgcccagatgagccgcggtgtgcag
cgcaatccggtcgaggtcagcgtggagtccctgcacgaggggagcgccatcgaacagaag
ctgtatgaagtcccggccggtcagcgcctcgacgccctcacctggctgctgagccactat
caaccggcctcctgcgtggtgttctgcaacaccaagcgggcctgcaacgacgtggccgat
catctggccgccaagggcttctcggcgctggcactgaacggcgatctggaacagcgggag
cgggatcaggtgctggtgcgctttgccaacggcagcgccaccattctggtggccaccgac
gtggccgcccgcggtctcgacatcaaggagctgggcgccgtcatcaactacgagctgacc
tatgatccggaagtgcacgtgcaccgcatcggtcgtaccggtcgtgcaggccagcagggt
ctggccctgagcctctaccagccgaacgaggcccagcgcgtcaacctcatcgaggagtac
cagcaggcccccatgccgcagggcgatctggccgagattggtcgcgagatcaagccgatt
gcgccgcagatggtgaccctctccatcgatgcaggccgcaagaccaaggtgcgcgccggt
gacattctgggcgccctgaccggtgaaggcggcattgccggtgccgatgtaggcaagatc
cagatctccgaacagtactcctacgtggcggtaaagcgcagcgtagggagcgccgccctc
aagcggttgcaggaaggcaagatcaagggccgaacctaccgcgcccgcaaactgggttaa
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