Aeromonas salmonicida O23A: O23A_p4220
Help
Entry
O23A_p4220 CDS
T04990
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aeo
Aeromonas salmonicida O23A
Brite
KEGG Orthology (KO) [BR:
aeo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aeo03016
]
O23A_p4220
Enzymes [BR:
aeo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
O23A_p4220
Transfer RNA biogenesis [BR:
aeo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
O23A_p4220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
Motif
Other DBs
NCBI-ProteinID:
ARW84957
UniProt:
A0AAX3VQI0
LinkDB
All DBs
Position
complement(4476668..4478719)
Genome browser
AA seq
683 aa
AA seq
DB search
MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQAVTRFVGRVKMFRDRLNVVPDHPLIKDAIKARAKKGLDE
KSFKEGDWVVATLKRHALSDGNFSAEIIEKIADQEDHNVPWWVVLARHNLAQIEPADLPE
WKVIEEEELPRTDLTATPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLLIAEDGLLLEETE
FFAARIISHARLNYDEVSDWAEQGKPLEIDAGVMAQLPLMKAMTEARIKWRTEHALVFPD
RPDYDFELGENGAVLAIHVEPRRIANRMIEESMIAANICAGRVLGKSVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFERDEIASLTGFCALRRWIDNLDTRWLDGKIRRFQSYALMSSE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGDRPSQELTEHLTACRRLHR
MVERDIGDWLYVRYLKAAAGTDQVFNAEIIDVMRAGLKLRLRENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQVIEVKLSEAVEETRSLIAKPAVELVPGPAPEAPVAD
SAVTENTVAESTETPAEAAPKAE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgttatccgcgcctcggaccggggcttcggctttctggaagtcgatgag
aagaccagctatttcgtgccgcccccctacatgaaaaaggtgatgcacggtgaccgggtg
agcgccctgatccgtaccgaaaaagagaaggaagtggccgaaccggatgccctgctggag
caggcagtgacccgtttcgtcggtcgcgtcaaaatgttccgtgaccgcctcaacgtggtg
ccggaccatcccctcatcaaggatgccatcaaggcccgcgccaagaagggtctggatgag
aagtccttcaaggaaggggactgggtggttgcgaccctcaagcgccacgccctgagtgat
ggcaacttctctgccgagatcatcgaaaagatcgccgatcaggaagaccacaatgtgccc
tggtgggtagtgctggctcgccataacctggcccagatagaaccggctgatctgccggag
tggaaggtgatcgaggaagaggagctgccacgcaccgatctgaccgcgacccccttcttc
accattgacggcgccaagaccaaggacatggatgacgccctggccatccgcaaactggac
aacggctgggagctgctggtcgccatcgccgacccgaccgcctatgtggccgaaggcagc
gagctggacaaggaagccgcccagcgcgccttcactgtctacatgccgggtcgcaacgtg
cccatgataccgcgcaccctctcggacgagctctgctccctgaaagagggcgaggagcgc
aacacgctctgcgcccgcctgctgatcgccgaagatggcctgctgctggaggagaccgaa
ttcttcgccgcccgcatcatctcccatgcccgtctcaactatgacgaggtctccgactgg
gccgaacagggtaaaccccttgagatcgacgccggcgtgatggcccagctgccgctgatg
aaggccatgacggaggcgcggatcaagtggcgtaccgagcacgccctggtgttcccggac
agacccgactacgacttcgagctgggggaaaatggcgcagtgctggccattcacgtggaa
ccgcgccgcatcgccaaccgcatgatcgaagagtcgatgatcgcggccaacatctgcgca
ggtcgcgtgctgggcaagagcgtcggctacggcatcttcaacgtccacacagggttcgat
gaagagtccctcgacggcgccatcgacctgctgaaaagcgccgaggccccattcgagcgc
gacgagatcgccagcctgaccggcttctgcgccctgcgccgctggatagacaacctggac
acccgctggctggatggcaagatccgccgcttccagagctatgcgctgatgtcctccgag
ccgggtgcccactacggcctggggctggatgcctacgcgacctggacctccccaatccgc
aaatacggcgacatggtcaaccatcgcctgctcaaagccgtcatcgccggcaagaccccg
ggcgatcgtccgagccaggaactgaccgagcacctgaccgcctgtcgtcgcctgcaccgc
atggtggaacgcgacatcggcgactggctctatgtccgttacctcaaggctgccgccggc
accgatcaggtgttcaacgccgagatcatcgacgtgatgcgcgccggtctcaagctgcgc
ctgcgcgaaaacggcgccgttgtcttcatgcccgcccgtcacatcctggacaacaaggat
cggctggagtgcaactgggacaatggccgtgtctacctggacaagaccgaagtggtctat
gaactgggtcaggttatcgaggtcaagctgagtgaagcggtggaagagactcgctccctc
atcgccaaaccggcagtggagctggtaccaggcccggcaccggaagccccggtggccgac
agtgccgtaaccgagaacacggtagccgaaagcactgagacaccagccgaggccgccccc
aaggcggaataa
DBGET
integrated database retrieval system
