Altererythrobacter epoxidivorans: AMC99_00508
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Entry
AMC99_00508 CDS
T04070
Name
(GenBank) DEDDh 3'-5' exonuclease domain of the epsilon subunit of DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
aep
Altererythrobacter epoxidivorans
Pathway
aep03030
DNA replication
aep03430
Mismatch repair
aep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMC99_00508
03430 Mismatch repair
AMC99_00508
03440 Homologous recombination
AMC99_00508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aep03032
]
AMC99_00508
03400 DNA repair and recombination proteins [BR:
aep03400
]
AMC99_00508
Enzymes [BR:
aep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMC99_00508
DNA replication proteins [BR:
aep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMC99_00508
DNA repair and recombination proteins [BR:
aep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMC99_00508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ALE15819
UniProt:
A0A0M5L6H8
LinkDB
All DBs
Position
489017..489709
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AA seq
230 aa
AA seq
DB search
MLGNLLGGPGPKLVRVFEKAAKAAPPGPLADFYAAGLPDLSQPVGNAPLTAIDLETDGLD
AKTDSILESGSIEIFGGLIGANSASRIRIRPDRGLNADAVVVHRITDDEAAKALPLEEAF
AQILKLCTGRVLVAHFAEIEAGFLDAASRKLYGAPLVAPFICTMQLEMRWVQKQRAHDGL
RLGKLRSQYGLPTYRAHDGLTDAVACGELLLAQLASAGRQQAPIMDLLRR
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcaatttgctcggcggtcccggacccaagctggttcgcgtattcgagaaagcg
gccaaggcagcgccgcccggaccgctcgccgacttctatgccgccggtttgcccgatctg
agccagccggtcggcaatgcgccgctgacagcgatcgatctcgaaacggacgggctggac
gcaaaaaccgacagcatcctcgaatcgggcagcatcgagatctttggcggactgatcggg
gcgaacagcgccagccgcattcgcatcaggccagataggggactcaacgccgacgcagtt
gtcgtgcatcgcatcaccgacgacgaagcggcaaaagccttgccgctggaagaggcgttc
gcgcagatattgaagctttgtaccgggcgggttctcgtcgcgcatttcgccgagatcgag
gccggcttcctcgatgccgcatcgcgcaaactctatggcgcgccgctggtcgctcccttc
atttgcaccatgcagctggaaatgcgctgggtgcagaagcagcgcgcgcatgacggcctg
cgcctcggcaagctgagatcgcaatacggcctcccgacctatcgagcacacgacggtctg
acggatgccgtggcgtgcggcgaattgctgcttgcacaactggccagcgcaggtcgccag
caagcgccaataatggaccttctgcgtcgctga
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