KEGG   Altererythrobacter epoxidivorans: AMC99_00822
Entry
AMC99_00822       CDS       T04070                                 
Name
(GenBank) Excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
aep  Altererythrobacter epoxidivorans
Pathway
aep03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AMC99_00822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aep03400]
    AMC99_00822
DNA repair and recombination proteins [BR:aep03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AMC99_00822
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AMC99_00822
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 DUF87 UB2H AAA_22 Kinesin AAA_16 SWI2_SNF2 Microtub_bd TrwB_AAD_bind
Other DBs
NCBI-ProteinID: ALE16125
UniProt: A0A0M4MUQ3
LinkDB
Position
complement(774487..776673)
AA seq 728 aa
MAELVIRRGLEEPDTSGAFVPHKPARPDKSDGGRRFKLVSDYEPAGDQPTAIAELVAAAK
EGEQTQTLLGVTGSGKTFTMAKVIEELQRPALILAPNKILAAQLYGEFKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMVFDIKKGETVDQRELIRKLVALQYKRNDVAFGRGSFRVRGDNLELFPSHLED
TAWRISFFGDEIEDISEFDPLTGKKGSDLAKVRVYANSHYVTPGPTMKQASEAIKFELQE
RLKELHEEGRLLEAQRLEQRTNFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMAKGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FCVSATPGGWELEQTGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCIEECKKTAAKGYRT
LVTTLTKRMAEDLTEFMHEAGVKVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVCILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADRITGSMERAMAETE
RRREKQREYNEEHGITPQTIKRQIADIVAHSAAADSVTIDTGDDERNNLVGHNLRSYIED
LEKRMRAAAADLEFEEAGRLRDEIRRLENDELGLPEGEHKAPRVGRSNEGKPGTRKLRYG
KSQRKWGK
NT seq 2187 nt   +upstreamnt  +downstreamnt
atggccgaactcgtaattcgcagaggattggaagaaccggacactagcggtgctttcgtc
cctcacaaacccgctcgcccggacaagtcggacggcggacgtcgcttcaaactcgtttcc
gattacgagcctgccggtgaccagccgacggcgattgcggaacttgtggctgccgccaag
gaaggcgaacagacgcaaaccctgcttggcgtcaccggttcgggcaagactttcaccatg
gccaaggtgatcgaggaattgcagcgcccagcgctgatcctcgctccgaacaagatcctc
gccgcccagctttatggcgagttcaagagcttcttccccgaaaacgcggtcgaatatttc
gtatcctattacgactactaccagccggaagcctacgtgccgcgctcggacacctacatc
gagaaggaaagctcggtgaacgaggcgatcgaccggatgcgccactcggcaacccgcgcc
ctgctcgaacgcgacgacgtgatcatcgttgcgtcggtttcgtgcctctacggtatcggt
tcggtcgaaacctattcggccatggttttcgacatcaagaagggcgagacggtcgaccag
cgcgagctgatccgcaagctcgtcgccctccagtacaagcgcaacgatgtcgcctttggt
cgcggctcattccgtgtgcgcggcgacaatctcgaactgtttccctcgcacctcgaagat
accgcctggcggatcagcttcttcggtgacgagatcgaggacatcagcgaattcgatccg
ctgaccggcaagaagggctctgaccttgccaaggtgcgcgtctatgcgaactcgcactac
gtaacgcccggcccgacgatgaagcaggccagcgaggccatcaagttcgagctgcaggaa
cgcctgaaggaactgcacgaggaaggccgcctgctcgaagcgcagcggctggaacagcgc
accaatttcgaccttgaaatgatcgctgccaccggcagctgcgcggggatcgagaactat
tcgcgcttcctgacgggccgcctgccaggcgaaccgccgccgacgctgttcgaatactta
cccgaaaacgcactgctgttcgtcgacgaaagccaccagacagtgccgcagatcggcgcg
atggcgaagggcgaccaccgccgcaagctgacgctggccgaatacggtttccgcctgccg
agctgtatcgacaaccgtccgctgcgcttcaacgaatgggacgcaatgcgcccgcagacc
ttctgcgtttcggccacgcccggcggctgggagctggagcagaccggcggtgtcttcgcc
gaacaggtcatccgccccaccggcctgatcgatccaccggtcgaaatccgcccggtcgag
gaccaggtccaggattgcatcgaggaatgcaagaagacggcggcgaagggttatcgcacg
ctcgtcaccacgctgaccaagcggatggcggaagacctgaccgaattcatgcacgaagca
ggcgtgaaggtccgctacatgcactccgacgtcgagacgctggaacgtatcgagctgatc
cgggacctgcgcctcggcgtttacgacgtgctggtcggcatcaacctgctgcgcgaaggg
ctcgacattcccgagtgcgggctggtctgtattctcgatgcagacaaggaaggtttcctg
cgttcggaaacctcgctgattcagaccatcggccgcgccgctcgtaacgtcgacggcaag
gtcatcctctatgccgaccggatcaccgggagcatggagcgcgccatggccgaaaccgag
cgtcggcgcgaaaagcagcgcgaatataacgaggaacacggcatcacgccgcagacgatc
aagcgccagatcgccgacatcgtcgcgcattccgcagcagccgacagcgtcacgatcgat
acaggtgatgacgagcgcaacaacctcgtcggacataacctgcgttcctacatcgaggat
ctggaaaagcgcatgcgtgcagcagcagccgatctggaattcgaagaggcaggccgcctg
cgcgacgaaatccgccggctcgagaacgacgaactcggattgcccgaaggagaacacaag
gcaccgcgtgtcgggcgatctaacgagggaaaaccgggtacccgcaaattgcgctacggc
aagagccagcgcaagtggggcaaatga

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