Altererythrobacter epoxidivorans: AMC99_01017
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Entry
AMC99_01017 CDS
T04070
Name
(GenBank) Domain often clustered or fused with uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
aep
Altererythrobacter epoxidivorans
Pathway
aep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMC99_01017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aep03400
]
AMC99_01017
Enzymes [BR:
aep01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AMC99_01017
DNA repair and recombination proteins [BR:
aep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMC99_01017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
ALE16315
UniProt:
A0A0M4M3U5
LinkDB
All DBs
Position
965156..966640
Genome browser
AA seq
494 aa
AA seq
DB search
MTSLNSFVRNVALGSHYVVHLPTSDDFDFWRERARGLVQCDVPPDRVSWVEPGGTSDLFA
HEGPARGEKRLPVPENANRPVRASKRFVSIARNAALHSDPQRFALLYSLLWRLQSQHRLM
EDSADPEVRRAEELAKAVRRDSHKMHAFVRFRLVEGEPGEEGTRGGENDHYVAWFEPDHH
IVRANAGFFMRRFANMRWSILTPRGCLHWDGEVMREGPSAQRSDAPSGDPTEELWRTYYA
SIFNPARLKVGAMLKEMPRKYWKNMPEAALIPDLIANAQKRESTMVASGSLEFEDRPETL
EAIDEAIHRCRNCPIGSLNNHAVMGEGPHDARFMIVGEQPGDQEDLQGRPFVGPAGQLLD
VHLGMAGIDRRRAYVTNAVKHFKFSMRGKLRLHQNPGAKEIDTCRWWLEAERQIVQPRLV
LAMGASAARGLLGKTVSISKARGAPIQLEDGSELWVTAHPSYLLRLEGDARQEQERLFAA
DLAAVKARLAQLEA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgctcaattctttcgtccggaacgtcgcgctcggatctcactacgtcgttcac
ctgccgacgagcgacgatttcgatttctggcgcgagcgtgcgcgcggcctggtccagtgc
gatgtcccgcccgatcgcgtgtcatgggtcgagcccggcgggacgtcggacctgttcgcg
catgaagggcctgcgcgcggtgaaaagcgactgccggtgccggaaaacgccaaccgtccg
gtgcgggcgagcaagcgcttcgtgagcattgcaaggaatgcggcgcttcattccgatccg
cagcgtttcgccttgctctattccctgctgtggcggctgcagtcccagcaccggctgatg
gaagacagcgctgatcccgaggtgcgccgtgcggaggaactggcgaaggcggtgcgccgc
gacagtcacaagatgcatgccttcgtccgctttcgcctggtggaaggcgaaccgggcgag
gagggcacgcgcggaggcgaaaacgaccattacgtcgcctggttcgagcccgatcatcac
atcgtgcgcgccaatgccggtttcttcatgcgccgtttcgccaacatgcgctggtcgatc
ctgacgccgcgaggctgcctgcactgggatggcgaggtgatgcgcgaggggccgtcggcg
cagcgatccgacgcaccttccggcgatcccacggaagagttgtggcgcacctattacgcc
tcgatcttcaatccggcacggttgaaggtcggcgcgatgctgaaggaaatgccgcgcaaa
tactggaagaacatgcccgaggcggcgctgatccccgacctgatcgcaaatgcgcaaaag
cgggaaagcaccatggtggcgagcggttcgctggagttcgaggatcgtcccgaaacgctg
gaagccatcgacgaggcgatccatcgctgccgtaattgtcccatcggctcgcttaacaac
catgcggtgatgggcgaggggccacacgatgcgcgtttcatgatcgtcggcgaacagccg
ggcgaccaggaggacttgcaggggcggccattcgtcggtccggcaggacaattgctcgac
gtgcatctgggcatggccgggatcgaccgccgccgtgcctatgtcaccaatgcggtcaag
catttcaaattttcgatgcgcggcaagctccggctgcaccagaaccccggcgcaaaggaa
atcgacacctgtcgctggtggctggaggcagagcgccagatcgtgcaaccccggctggtg
ctggcaatgggcgcatcggctgcgcgcgggttgctgggcaagacagtgagcatttccaag
gctcgtggcgcgccgatccagctcgaggatggcagcgaattgtgggtcacggcgcacccg
tcctacttgctgaggctggagggggatgcacgccaagagcaggagcggttgttcgcggcc
gatcttgcggcggtaaaggcccggctcgcgcagctagaggcatga
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