Altererythrobacter epoxidivorans: AMC99_01322
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Entry
AMC99_01322 CDS
T04070
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aep
Altererythrobacter epoxidivorans
Pathway
aep03030
DNA replication
aep03430
Mismatch repair
aep03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMC99_01322
03430 Mismatch repair
AMC99_01322
03440 Homologous recombination
AMC99_01322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aep03032
]
AMC99_01322
03400 DNA repair and recombination proteins [BR:
aep03400
]
AMC99_01322
Enzymes [BR:
aep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMC99_01322
DNA replication proteins [BR:
aep03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMC99_01322
DNA repair and recombination proteins [BR:
aep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMC99_01322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
COE1_HLH
DUF655
Motif
Other DBs
NCBI-ProteinID:
ALE16616
UniProt:
A0A0M3TAE2
LinkDB
All DBs
Position
complement(1276992..1280480)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAFAPFVPLRVLSSYSMLEGAIDPKGIAKLAKERGFPAIAICDRNGLYGAVMFANACKVE
GIQPIIGTLLGVARDEEGKQVDYLPLYAQDEAGYDNLCHLVSKAHLDRPLEYEPHVQLAD
LDGHTDGLIALTGAGEGALTRLLAEGQAGHAEILCDRLQALFRDRLYVELARNGDEVASR
AEQALIDLAYARDLPLVATNPANFSEPHMFKAHDAMLCIANSTHIEAEDRVRTNRQAFVK
TAKMMEEAFEDLPEATANSVVIAQRCAYAPPYRKPILPSLAGDLEGEARMLAEDARKGLE
ARLEPYGEMSAEERKKYFDRLDYEVDIIVKMGFPGYFLIVADFIKWAKDNDIPVGPGRGS
GAGSLVAWALTITDLDPIKLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQRKYGH
DHVAQIITFGKMKARAVLRDCGRILQMSYGHVDRLCKMVPNHPTDPWTLPRALNGAADFK
REYDNDNEVKRLIDLAMELEGLPRNSSTHAAGVVIGDRPLAQLVPLYRDPRSDMPVTQYD
MKNVESSGLVKFDFLGLKTLSVLRKAVALLEKRGIDLDLSQLPLDDTAVYDLMQSGNTVG
VFQLESEGMRRTLTAVKPTNFGDIIALVSLYRPGPMDNIPLFGKRKAGEVPIEYPHEKLE
GILAETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKVQAEMDAQRQRFTDGCKEV
SNIDAKKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPEEFYAASMCFDMHQ
SEKLAVFVDDARRYPNGNGGVEVLPPDVNHSEARFTVEQTDHGYAVRYALAGIRNVGEKA
MEAIVAEREGSGPYTSLQDLFERMPKGAMNSRQLEGLAAAGALDGLEPDRAKVFSNADML
LAVADAAERERSSGQAGLFGGEGEVEDSLRLKEVEPWTRAERMAKERENFGFYFSAHPVQ
QHWPIASANGARTYQSLIEAGAPPGGRSSAVMAAMVEGYSKGRTKRGADFIRADFSDSSG
QFSAACFEESLVPQFERWASDGTCLLLTVELDAPNPNDPPRVTVRGARPLDEVKGATRMI
LTLDVLTPEALTELKLQLGTEGGGESEVVARLVLGGGRDVYVRLGRNFTLDGDLAERISA
VQGLDKVMLQPLRSKASLRLVA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgctcctttcgtcccgctgcgtgttctatcttcctattcgatgctcgaaggg
gcgatcgacccgaagggtatcgccaagctggcaaaggaacgggggtttcccgccattgcg
atctgcgaccgcaacggattgtacggggcggttatgttcgccaatgcgtgcaaggtagaa
ggcattcagccgatcatcggcactctgctgggtgtcgcccgcgacgaagaaggcaagcag
gtcgattacctgccgctctacgcgcaggacgaggccggttacgacaatctgtgtcatctg
gtgtcgaaggcacatctggacaggccgctcgaatatgaaccgcatgtccagcttgccgat
ctagacggacatacggacgggctgatcgcgctgaccggtgctggcgagggcgcactcacc
cgcttgctggcggaaggccaggcggggcacgctgaaatcctctgcgaccggctgcaggct
cttttccgcgaccggctctatgtcgagctcgcccgtaatggtgacgaggttgcatctcgt
gccgaacaggccctgatagacctcgcctatgcgcgcgacctgccactggtcgcgaccaat
ccggcaaacttttccgaaccgcacatgttcaaggcgcacgacgccatgctgtgcatcgcg
aattcgacgcatatcgaggcagaggatcgcgtcaggaccaatcgtcaggccttcgtcaag
acggcgaagatgatggaggaagcgttcgaggaccttcctgaagccaccgccaatagcgtg
gtcatcgcgcagcgctgcgcctatgcgccgccctatcgcaagccgatcctgccaagcctc
gccggcgatctcgaaggtgaggcccggatgctcgccgaagacgctcgcaagggtctggag
gcgcggctcgaaccttatggcgagatgagcgccgaagagcgcaagaaatatttcgaccgg
ctcgactacgaggtcgatatcatcgtgaagatgggcttcccgggctatttcctgatcgtt
gccgacttcatcaaatgggcgaaagacaacgatatcccggtgggtccgggtcgtggctcg
ggtgctggctcgctggtcgcatgggcactcaccattaccgatctcgacccgataaagctc
ggtctgctgttcgaacgattcctcaacccggaacgcgtgtcgatgcccgacttcgatatc
gacttttgcgaaacgcggcgcggtgaagtcatccgctatgtgcagcgcaaatatgggcac
gatcacgtcgcgcagatcatcacgttcggcaagatgaaggcccgtgccgtgctgcgcgat
tgtggccgcatccttcaaatgagctacggccatgtcgatcgcctgtgcaagatggtgccc
aaccatcccactgatccgtggacgcttccacgggcactgaacggggcggcggatttcaag
cgcgaatacgacaatgacaacgaggtcaaacgtctgatcgacctcgcgatggaactggaa
gggctgccgcgcaacagctctacccatgccgccggtgtcgtgatcggcgaccgtccgctg
gcacagctggtcccgctctatcgcgatccacggtcggacatgccggtcacgcagtacgac
atgaagaatgtcgaaagcagcggcctcgtcaaattcgactttctcgggctcaagaccctg
tcggtcctgcgcaaggcagtggccttgctggaaaagcgcggcatcgacctcgatctttcg
cagcttccgctcgatgacacggcggtttacgacctcatgcagtcgggcaacacggtcggc
gttttccagctggaatcggaaggtatgcgccgcacgctgaccgcggttaaaccgaccaat
ttcggcgacatcattgcactcgtttcgctctatcgcccgggtccgatggacaatatcccg
ctgttcgggaagcgaaaggcgggcgaggtgccgatcgagtatccgcacgaaaagctcgaa
ggcattctcgccgaaacctacggcattttcgtctaccaggaacaggtcatgcaggccgcg
cagatcctggccggctattcgctcggcgatgccgacttgctccgccgcgcgatgggcaag
aaggtgcaggcggaaatggacgctcagcgccagcgcttcaccgatggctgcaaggaagtc
tcgaatatcgacgccaagaaggcgaatgaactgttcgacttgatcgacaagttcgcaggc
tacggcttcaacaagtcgcacgccgccgcctatgccttgctcgcgtaccagaccgcctgg
ctgaaagcgcattatcccgaggaattctacgccgcttcgatgtgtttcgacatgcatcag
tcggaaaagcttgccgtgttcgtcgacgatgcgcgccggtatcccaacggcaatggcggg
gtcgaagtcctgccgcctgacgtcaatcattcggaagcgcgcttcaccgtcgaacagacc
gatcatggatatgccgtacgttacgcactcgcaggtatccgcaatgtcggcgagaaagcg
atggaggccatcgttgccgaacgtgagggaagcggaccttataccagcctccaggatctg
ttcgaacggatgccgaagggggcgatgaactcccgccagcttgagggccttgccgccgct
ggggctctcgacgggcttgagccggaccgtgcgaaagtgttctccaatgctgacatgctg
ctggctgtggcagatgctgcagagcgcgagagatcaagcgggcaggccgggctgttcggc
ggcgagggcgaggtggaggacagcctgcgcctgaaggaagtggaaccgtggacccgagcg
gaacggatggccaaggaacgcgagaatttcgggttctatttctcggcccatcccgttcag
caacattggccgattgcatcggcgaacggcgcgcgcacttatcagagcctgatcgaggca
ggggcgcctccaggtggtcgctcgtctgccgtcatggccgccatggtcgaaggttacagc
aaggggcggacgaaacgcggtgccgacttcatccgcgcggatttctcagattcgtccggg
cagttttcggctgcgtgtttcgaggaaagcctggtgcctcaattcgaacggtgggcttcc
gatggcacatgcctgttgctgacggtcgagctcgacgcgcccaatccgaatgacccgcct
cgtgtcacggtgcggggcgcacgccctctcgacgaggtgaaaggcgcgacgcggatgatc
ctcaccctcgacgtactgacaccggaagcgttgaccgaactgaagctgcagctgggaaca
gaaggcggcggtgaaagtgaggtagtggcgaggctggtgctcggcggcgggcgcgatgtt
tacgtgcggctaggccgaaatttcacgctcgatggcgacctcgccgaaaggatctcggcg
gtgcagggattggataaggtgatgctccagcccttgcggtcgaaggcgagcctacgtctc
gtcgcctga
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