Altererythrobacter epoxidivorans: AMC99_01594
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Entry
AMC99_01594 CDS
T04070
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aep
Altererythrobacter epoxidivorans
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aep03032
]
AMC99_01594
03400 DNA repair and recombination proteins [BR:
aep03400
]
AMC99_01594
Enzymes [BR:
aep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMC99_01594
DNA replication proteins [BR:
aep03032
]
Prokaryotic type
DNA Topoisomerases
AMC99_01594
DNA repair and recombination proteins [BR:
aep03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMC99_01594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALE16886
UniProt:
A0A0M3TAK5
LinkDB
All DBs
Position
complement(1555450..1556433)
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AA seq
327 aa
AA seq
DB search
MDDSLPGISRRGAGKGFAYYDPQGRLITDDAERKRLNAIALPPAYTDEWYCPAPNGHILA
TGYDARGRKQYRYHPDFRLQRESEKFDRCLAFGNLLPLVRKRVEDDLAGRKLTRERAIAS
VVRLLDLGAVRIGNEGYAQRNKSFGATTLRQRHAELTGKTLRLRYKGKGGKQREVVLTDG
SLAKVIRRMQDLPGQNLFKYVDDEGEHQAVASCDVNEYLRETMGDDFTAKNFRTWHASVT
GFECLYDASDPITIGALLDCVSDKLGNTPAIARKSYIHPAVIELVDRQEDWRGETDLPRA
TRWLTRAERGLIALLEKCPSSAELLAA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacagtctgccgggcatttcgcggcgcggtgcgggcaagggatttgcctattac
gatccgcaaggaaggctgattacggacgatgcagagcgcaagcggctgaacgccatcgcg
ctgccgcctgcctataccgacgaatggtattgccccgccccgaacgggcacatccttgcg
acaggatatgatgcgcgcggccgcaagcagtaccgttatcatcccgatttccgtctccag
cgcgaaagcgagaaattcgaccgctgcctcgccttcgggaatctgttgccgctggtgcgc
aagcgtgttgaagacgaccttgctggccggaagctgacgcgtgagcgcgcgattgcgagc
gtcgtacgccttctagatctgggtgccgtgcggatcgggaacgagggttacgcgcagcgc
aacaagagctttggcgccacgaccctgaggcagcggcacgccgagctgaccggcaagact
ctgagactgcggtacaaggggaagggcggcaagcagcgcgaagtcgttttgaccgacggt
agcctcgccaaggtcatccggcggatgcaggatctgcccggacaaaacctgttcaaatat
gtcgatgacgagggcgagcaccaggcagtcgcttcgtgcgatgtgaacgagtatttgcgc
gaaacgatgggcgacgatttcaccgccaagaatttccggacctggcacgccagcgtgacg
gggttcgaatgcctttacgatgcgagcgatccgatcacgatcggcgcgctgctggactgc
gtttcggacaagctgggtaatacgcctgcaatcgcccgcaagagctatatccatcccgcc
gtgatcgaactcgtcgatcggcaggaagattggcgtggtgagactgacttgccgcgcgcg
acccgatggctgacgcgggcggagcgcggtctgatcgccttgttggaaaaatgcccgagt
tcggcagagctactcgccgcataa
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