Altererythrobacter epoxidivorans: AMC99_02807
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Entry
AMC99_02807 CDS
T04070
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aep
Altererythrobacter epoxidivorans
Pathway
aep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMC99_02807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aep03021
]
AMC99_02807
03400 DNA repair and recombination proteins [BR:
aep03400
]
AMC99_02807
Enzymes [BR:
aep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMC99_02807
Transcription machinery [BR:
aep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMC99_02807
DNA repair and recombination proteins [BR:
aep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMC99_02807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
Apocytochr_F_C
RPOC_hybrid
YqfD
Motif
Other DBs
NCBI-ProteinID:
ALE18078
UniProt:
A0A0M4M6V9
LinkDB
All DBs
Position
2771576..2775868
Genome browser
AA seq
1430 aa
AA seq
DB search
MNELTKFTNQLAKPETFDQIQIGIASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRMKYKGVVCEKCGVEVTVTKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYIVTEPGLTPLEKNQLLTEDEMLEAQDEYGEDAFSAD
IGASAVKTMLMDLDLEQEREDLLEELATTKSALKPKKIIKRLKVVESFIDSGNRPEWMIL
EVIPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIVRNEKRML
QESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGLYYLSMERQEKTPEFIESGDGEKVEKLPRF
SDMAEVHQALEVKSVTLHTKIIARVPQADEDGNVVMQRFVTTPGRMLLGECLPKNHKVPF
DIVNRLLTKKDIADVIDEVYRHTGQKDTVLFADAIMSLGFRHAFKAGISFGKDDMIIPDS
KTELVEQTKSLVADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVADAMMEEIKAQPIGDD
GKQAQINSIYMMSHSGARGSPAQMKQLAGMRGLMAKPSGEIIENPIISNFKEGLNVLEYF
NSTHGARKGLADTALKTANSGYLTRRLVDVSQDCVIVEEDCKTENALEMRAIVQGGSVIA
SLGERILGRTVQEDLVNAKSGEVIVKAGTLIDEPMVKAIEEAEVQSAKIRSPLVCEAEQG
VCATCYGRDLARGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNETSHLEAVS
DGKVVYRDMPTIIDKKGRILSMARNGELAVIDAEGREREIHKVPYGTVLMHKDGGKVKEG
DRLAEWDPFSLPIITEQSGIVRYQDLVDGTTMEERVDEATGIAQRVVTELRASGRKKKED
LRPRLTLLNDAGDETEAARYMLAPGTTLSVEDGQEVAAGDILARASREAAKTRDITGGLP
RVAELFEARLPKDNSVIAKISGKIEFVREYKAKRKIAIVPEEGDAVEYLIPKTKVIDVQE
GDFVKKGDTLISGSPNPHDILEVLGVEALAEYLCTEIQEVYRLQGVKINDKHIEVIVRQM
LQKVEITDGGDTTLLPGEQVDLEEMNEINSKLGKGKAPAQGMPILLGITKASLQTRSFIS
AASFQETTRVLTQAAVEGKKDTLIGLKENVIVGRLIPAGTGAGMNRMRVTANSRDAALRA
AWKKQQEQLAASGEAEKEPEADAISSEEAMKAAMGGGSAAPEAAADAGEE
NT seq
4293 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactgaccaaattcaccaaccagctggccaagccggaaaccttcgaccagatc
cagatcggcattgcctcgcccgagcgcatccgttcgtggtcgttcggcgagatcaagaag
ccggaaaccatcaactaccgtacgttcaagcctgagcgtgacggcctgttctgcgcccgc
atcttcggtcctgtgaaggattacgaatgcctttgcggcaagtacaagcgcatgaagtac
aagggcgtcgtttgcgaaaagtgcggcgttgaagtcaccgtcaccaaggtgcgccgtgag
cgcatgggccacatcgaactggccgcgccggttgcacacatctggttcctgaagtcgctg
ccgtcgcgcatcggcctgctgctcgacatgcagctgaagcagctcgagcgcgtgctctac
ttcgaaagctacatcgtgaccgagccgggcctgaccccgctcgagaagaaccagctgctg
accgaagacgaaatgctcgaagcgcaggacgagtatggcgaagacgccttctcggccgac
atcggcgcatctgcggtcaagaccatgctgatggatctcgacctcgaacaggaacgcgaa
gaccttctggaagagcttgcgaccaccaagtccgctctgaagcccaagaagatcatcaag
cgcctcaaggtcgtcgaaagcttcatcgattcgggcaaccgcccggaatggatgatcctc
gaagtgatcccggtcatcccgccggaactgcgcccgctcgtcccgctggatggcggccgt
ttcgcgacgtccgacctcaacgatctctatcgccgtgtgatcaaccgtaacaaccgcctg
aagcgcctgatcgagctgcgtgcgccggacatcatcgtccgtaacgaaaagcgcatgctg
caggaatcggtcgacgccctgttcgacaacggtcgccgtggccgcgtcatcaccggtgcc
aacaagcgtccgctgaagtcgctgtccgacatgctcaagggcaagcagggccgcttccgc
cagaaccttctgggtaagcgcgtcgactattcgggccgttcggtcatcgtgaccggtccg
gaactcaagctgcaccagtgcggcctgccgaagaagatggcgctcgaactgttcaagccg
ttcatctacgcccgcctcgatgccaagggtctttcgatgaccctcaagcaggcgaagaag
tgggtcgagaaggaacgcaaggaagtctgggacatcctcgacgaagtgatccgcgagcac
ccggttcttttgaaccgtgcaccgacgcttcaccgtcttggcatccaggccttcgaaccg
gtcctgatcgaaggcaaggccatccagcttcaccctctggtctgcgccgccttcaacgcc
gacttcgacggtgaccagatggccgttcacgtcccgctgagcctcgaggcgcagctggaa
gcgcgcgtcctgatgatgtcgaccaacaacattctctcgcccgccaacggcaagccgatc
atcgtgccttcgcaggacatggtcctgggcctctactacctgtcgatggaacgccaggag
aagaccccggaattcatcgaaagcggcgacggcgaaaaggtcgagaagcttccgcgtttc
tcggacatggccgaagtgcaccaagcactggaagtgaagtcggttacgctgcacaccaag
atcatcgcccgcgtcccgcaggccgatgaagacggcaatgtcgtcatgcagcgtttcgtc
accactccgggccgcatgctgctgggcgaatgcctgccgaagaaccacaaggttcccttc
gacatcgtcaaccgcctgctgacgaagaaggacatcgccgacgtgatcgacgaagtctat
cgtcacaccggccagaaggacaccgtgctgttcgccgacgccatcatgtcgctcggcttc
cgccacgcgttcaaggccggcatctccttcggcaaggatgacatgatcattccggactcg
aagaccgagctggtcgaacagaccaagtcgctggttgccgattacgagcagcagtaccag
gacggcctgatcacccagcaggaaaagtacaacaaggtcatcgacgcctggagccgttgc
ggcgaccaggtggcggacgccatgatggaagagatcaaggcgcagccgatcggagacgac
ggcaagcaggcccagatcaactcgatctacatgatgagccactccggtgcgcgtggttcg
ccagcgcagatgaagcagcttgccggtatgcgcggcctcatggccaagccttcgggcgag
atcatcgagaacccgatcatctcgaacttcaaggaaggtctgaacgtccttgaatacttc
aactcgacccacggcgcccgtaagggtctggccgacaccgcgctcaagacggcaaactcg
ggttacctgacccgccgtctggtcgacgtgtcgcaggactgcgtcatcgtggaagaggac
tgcaagaccgaaaacgcgctcgaaatgcgtgccatcgtccagggcggtagcgttatcgcc
tcgctcggcgaacgcatcctcggccgtacggtccaggaagacctcgtcaatgcgaagtcg
ggcgaagtgatcgtcaaggccggaacgctgatcgacgaaccgatggtcaaggccatcgag
gaagccgaagtgcagtccgccaagatccgcagcccgctggtctgcgaagccgaacagggc
gtttgcgcgacctgttatggccgtgaccttgctcgcggtactccggtcaacatcggtgaa
gctgtcggcgttatcgctgcacagtcgatcggtgagccgggcacgcagctgaccatgcgt
accttccacatcggtggtgcggcgcagctcaacgaaacctcgcacctcgaagcggtgtcg
gacggtaaggtcgtctatcgcgacatgccgaccatcatcgacaagaagggtcgcatcctc
tcgatggctcgcaacggcgaactcgccgtgatcgacgccgagggacgcgagcgcgaaatc
cacaaggtgccttacggtaccgtcctgatgcacaaggacggcggcaaggtgaaggaaggc
gatcgcctggccgagtgggatccgttcagcttgccgatcatcaccgaacagtcgggtatc
gtccgctaccaggacctggtcgatggtacgacgatggaagaacgcgtcgacgaagcgacg
ggcatcgcccagcgcgtcgtcaccgagcttcgtgcttcgggccgcaagaaaaaggaagac
cttcgtccgcgcctgacgctgctcaacgacgccggcgacgaaaccgaggctgcacgttac
atgctcgccccgggcacgacgctgtcggtcgaggacggccaggaagtcgccgccggtgac
atccttgcacgtgcatcgcgtgaagctgccaagacgcgcgacatcaccggcggtctgccg
cgtgttgccgagctgttcgaagcacgcctgcccaaggacaattcggtcatcgccaagatt
tcgggcaagatcgaattcgtccgcgagtacaaggcgaagcgcaagatcgcgatcgttccc
gaggaaggtgatgcagtcgaatacctgatccccaagaccaaggtgatcgacgtgcaggaa
ggcgacttcgtgaagaagggcgacacgctcatctccggttcgccgaacccgcacgacatc
ctcgaagttctgggcgtggaggctcttgccgagtatctctgcaccgagatccaggaagtc
tatcgactgcagggcgtgaagatcaacgacaagcacatcgaggtgatcgttcgccagatg
ctgcagaaggtcgagatcaccgatggcggcgacaccacgctgctgccgggcgaacaggtt
gacctcgaagaaatgaacgagatcaactcgaagctgggcaagggcaaggctccggcgcag
ggtatgcctatcctgctcggtatcaccaaggcctcgctccagacgcgttcgttcatctcg
gctgcctcgttccaggaaacaacgcgcgtgctcacgcaggccgcggtcgaaggaaagaag
gacacgctgatcggtctgaaggaaaacgtgatcgtgggccgtctcatccccgccggtacc
ggcgcgggcatgaaccgcatgcgcgtcaccgccaacagccgcgacgcagcgcttcgcgca
gcatggaagaagcagcaggaacagcttgctgcttccggtgaggccgagaaggaacccgaa
gccgacgccatctcttcggaagaagcgatgaaggcggcgatgggcggcggcagtgccgct
cccgaagcggctgcggatgccggcgaggaataa
DBGET
integrated database retrieval system
