Aequorivita marisscotiae: QCQ61_04350
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Entry
QCQ61_04350 CDS
T10155
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aequ Aequorivita marisscotiae
Pathway
aequ03410
Base excision repair
aequ03430
Mismatch repair
aequ03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aequ00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QCQ61_04350 (recJ)
03430 Mismatch repair
QCQ61_04350 (recJ)
03440 Homologous recombination
QCQ61_04350 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aequ03400
]
QCQ61_04350 (recJ)
DNA repair and recombination proteins [BR:
aequ03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QCQ61_04350 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QCQ61_04350 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QCQ61_04350 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
TLP-20
ddrB-ParB
Motif
Other DBs
NCBI-ProteinID:
WGF94119
UniProt:
A0ABY8L035
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All DBs
Position
929047..930735
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AA seq
562 aa
AA seq
DB search
MRWTLKPKPDPEKVNSLSKALKIEPLIASLLVQRGVETFEEAEKFFRPNLDNLHDPYLMK
DMDKAVLRIQKAIENEEYILVYGDYDVDGTTSVALLSSYLKSYYPNVSTYIPDRYNEGYG
VSYKGIDYAEDNGFSLIIALDCGIKAIDKVGYASEKNIDFIICDHHRPGKEIPKAVAVLD
PKRDDCFYPYKELCGCGVGFKLIQALAEKRGLQLEDLLLYLDLVATAIAADIVPITGENR
ILAHYGLKVINSNPRTGIQAILKQVKKEKLTITDVVFIIAPRINAAGRMKHGNHAVALLT
ETDFEKAQTYAAEIETFNTDRREADKQITEEALQQIIANKEEARKTTVVYQENWHKGVIG
IVASRLTETYYRPTLVFTKSGEKLAASARSVKGFDVYNALESCSEHIEQFGGHMYAAGLT
LFEKDFENFKNEFERVVSETIDPHLLTPEIRIDTEINLQDITPKFFRILKQFAPFGPGNM
TPTFMTQNLMDTGWGKCVGEDKTHLRVVVKQGNSNQFTGIGFGLADKQDIACGGKPFMAA
YCIDENEWQGNISLQLRLKDIR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggaccctaaaaccaaaacccgatcccgaaaaagtaaattcactttcaaaagcc
ttgaagattgaaccacttattgcttcgcttttggtacagcgcggggtagaaacttttgaa
gaagccgaaaaattttttcgcccaaatttggacaatcttcacgatccgtatcttatgaaa
gatatggataaggcggttttgcgcattcaaaaagcaattgaaaatgaagaatacatattg
gtttacggtgattacgatgtagatggaaccacaagcgttgccttgctttcttcatactta
aaaagttattaccctaatgtttcaacctatattcccgaccgttataacgaagggtatggc
gtatcgtataaaggaattgattatgccgaagacaatggtttttcgttaattatagcttta
gattgcggtataaaagccatcgacaaagttggctacgcatccgaaaaaaatatcgatttt
atcatttgcgatcaccaccgaccggggaaggaaattccgaaagccgtggccgtactcgac
ccaaaacgggatgattgcttctatccgtacaaggaactttgcgggtgcggtgttggtttc
aaattaattcaagctttagccgaaaaacgaggtttacagcttgaagatttattgctgtat
ttagatttggtagctactgcaattgcagcagatattgtaccaatcaccggtgaaaaccgc
atccttgcacactacggtcttaaagtaataaacagcaatccacgaacgggaatacaagca
atcttaaagcaagtaaaaaaggaaaaacttaccattaccgatgtagtttttataatagcc
ccgcgcatcaacgccgccggacgaatgaaacacggaaaccacgctgttgcgctccttact
gaaacagattttgagaaagcccaaacgtacgccgcggagattgaaacttttaacacggac
cgacgtgaagcagacaaacaaattacagaggaggcactacagcaaataattgctaataaa
gaagaagcacgtaaaaccactgttgtttatcaagaaaactggcacaaaggggttattggc
attgtggcttcccgattgaccgaaacctattatcgcccaactttagtgtttaccaaaagt
ggcgaaaagcttgctgcatcggcccgatctgtgaagggatttgatgtgtataatgcgttg
gaaagttgttcggaacacatcgagcaattcggagggcatatgtatgccgcaggtttaaca
ttatttgaaaaagatttcgaaaattttaaaaatgaatttgaacgcgtggtttcagaaacc
attgatccacatttgcttacccccgaaattagaatagataccgaaataaacctgcaagac
atcaccccaaaatttttcagaattttaaaacaatttgcccctttcggccctggaaatatg
acacccacttttatgacccaaaacctaatggataccggttggggaaaatgtgtgggggaa
gataaaacacatttacgcgtcgtggtgaaacaaggaaattcgaaccaatttacgggaatt
gggtttggtttggcagataaacaagatatcgcctgcggcggaaaaccttttatggcagcg
tattgtattgatgaaaacgaatggcaaggaaacattagcctgcaattacgtttaaaagat
attcgttaa
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