Aequorivita marisscotiae: QCQ61_06795
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Entry
QCQ61_06795 CDS
T10155
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aequ Aequorivita marisscotiae
Pathway
aequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QCQ61_06795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aequ03019
]
QCQ61_06795
Enzymes [BR:
aequ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QCQ61_06795
Messenger RNA biogenesis [BR:
aequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QCQ61_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
DUF2828
ERCC3_RAD25_C
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
WGF93888
UniProt:
A0ABY8KWW5
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All DBs
Position
1490571..1491845
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AA seq
424 aa
AA seq
DB search
MTFKSLGLSDALLKAISKKGYETPSAIQQKAIPLILESKDVLASAQTGSGKTAGFALPIL
QILNSEPAFRKRPVRALILTPTRELAAQVQDEFKEYSEYTDLRSTVIFGGVGANPQIRAL
RNGVDILVATPGRLLDLENQNALSLSKVEILVLDEADRMLDMGFLRDIKKILALLPSKRQ
NLLFSATFSKEIKKLANEFLHHPVLVEATPENTTVEKIDQTVYRVDKAQKTELIIKLISE
GNWKQVLVFTRTKHGANRLSEKLEKVKITSAAIHGNKSQGARTRALSGFKEGRIRVLVAT
DIAARGLDIPLLPHVINYELPNVSEDYVHRIGRTGRAGASGEALSLVSLDEVGYLKDIEK
LIGERLQPKTLPDFQPTETMADVKAAEEEKKQQRANRHSRGRNAQSKKSAQGKKQNSGRN
RGRR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaatctcttgggctttccgatgccctgctaaaagcaattagcaaaaaagga
tatgaaacgccttcggcaattcaacaaaaagcaattcccttaattttagaaagcaaagat
gtgttggcatcggcacaaacgggaagtggaaaaaccgctggttttgcattgcccatttta
caaattttaaatagtgaacccgcttttcggaaaagacccgttagagcattaatacttacc
ccaacgcgcgaacttgcggcgcaagtgcaggatgaatttaaagaatatagcgaatataca
gacctgcgttctaccgttattttcggtggcgtgggtgcaaatccacaaattagggcattg
cgaaatggggtggatatattggtagccacacccggtagattgctggacttggaaaatcaa
aatgcgctttccctttcaaaagtagaaattcttgtattggatgaagccgatagaatgctc
gatatgggttttctgcgcgatattaaaaaaattctggcgctacttccttctaaaagacaa
aatttgcttttctccgcaactttttcaaaagaaataaaaaaactggcaaatgaatttctt
catcatcctgttttagttgaagctactccagaaaatacaaccgttgaaaaaattgatcag
accgtatatcgggtagataaagcacaaaaaacagaattaatcataaaattaatttcggaa
ggaaactggaaacaagtactcgtttttacacgaaccaagcacggtgccaatcgtttaagt
gaaaaacttgaaaaggtgaaaattacttctgccgctattcacggtaataaaagtcaaggc
gcgcgaacacgagcgctttctggatttaaagagggaagaatacgcgttttggtagcaacc
gatattgcagctagagggttggatattccattgttgccacacgtaattaattatgaattg
ccaaacgtttccgaagattatgtgcaccgtattggccgtaccggaagggcaggggccagt
ggtgaagcactttcattggtaagtctagatgaggttggctatttaaaggatattgaaaag
ttgattggcgaacggctgcagcccaaaacccttcccgactttcaacccacagaaaccatg
gccgatgtaaaagctgctgaggaagaaaagaaacaacaaagggcaaatcgtcacagtcgt
gggaggaatgcacaatctaaaaaatccgcccaaggcaagaaacagaatagtggcagaaat
agaggtagaaggtag
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