Aequorivita marisscotiae: QCQ61_08040
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Entry
QCQ61_08040 CDS
T10155
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aequ Aequorivita marisscotiae
Pathway
aequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QCQ61_08040 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aequ03021
]
QCQ61_08040 (rho)
03019 Messenger RNA biogenesis [BR:
aequ03019
]
QCQ61_08040 (rho)
Transcription machinery [BR:
aequ03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QCQ61_08040 (rho)
Messenger RNA biogenesis [BR:
aequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QCQ61_08040 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
NACHT
Motif
Other DBs
NCBI-ProteinID:
WGF91169
UniProt:
A0ABY8KNY7
LinkDB
All DBs
Position
complement(1757525..1759282)
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AA seq
585 aa
AA seq
DB search
MFEISELKNKKLPELQDIAKELNVPKYRTQKKLDLVYQILDYQAANPKAVKAVLNADTSA
PDTKKDDKAPSASDKAEKDNKSNQQKSNSRNKKTQPQKQQHTKKSDDAKKADDPKKGDDN
KKGGDDKKSADDKKHTSDKRSSNDKGDKKNSDKKQQHQKSGANDNRQKHQRSDNSNSDNR
QKHQSHKQKDGNTHDNRNNGNKDSRNRYREPDYEFDGIIESEGVLDIMQDGYGFLRSSDY
NYLSSPDDIYVSQSQIRLFGLKTGDTVLGEVRPPKEGEKYFPLIKVVKINGLNPNVVRDR
VSFEHLTPLFPQEKFNIADKQSTISTRIIDLFAPIGKGQRGMIVSQPKTGKTMLLKDIAN
AIAANHPEVYQIVLLIDERPEEVTDMQRNVRGEVVASTFDKEATEHVRVANLVIDKAKRL
VECGHDVVILLDSITRLARAYNTVQPASGKILSGGVDANALHKPKRFFGAARNIENGGSL
SIIATALTETGSKMDEVIFEEFKGTGNMELQLDRKISNRRIFPAIDLTSSSTRRDDLLLD
ENTIQRMWVLRKYLADMNPVEAMEFINDRIKQTRNNEEFLISMNG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatttcagaattaaaaaacaaaaagcttcctgaacttcaggatatcgctaaa
gaactcaatgtgccgaaatatcgcacacaaaaaaaattagacttggtatatcaaattcta
gactaccaagccgcaaatcccaaggctgttaaggcagtcttgaatgcagacacttctgcc
cccgacacaaaaaaagacgataaagccccttccgcctcggacaaagctgaaaaagacaat
aaatccaatcagcaaaaaagcaatagccgaaacaaaaaaacacagcctcaaaagcaacaa
cacactaaaaaaagtgatgatgcaaaaaaagctgatgaccccaaaaaaggtgatgacaat
aaaaaaggtggcgacgacaaaaaaagtgctgacgataaaaagcatacttcagataagcgc
tcttctaacgataaaggcgacaaaaagaatagcgataaaaaacagcaacaccaaaaatct
ggtgctaatgataataggcagaagcatcagcgcagtgataattcaaattcagacaaccgt
caaaagcaccaaagccacaagcaaaaagatggcaatacgcacgacaaccgaaacaatggc
aataaagattctcgcaatagatacagagaaccggattacgaatttgacggtataattgaa
agtgaaggcgtactagacattatgcaggatggctacggatttttacgatcaagcgattat
aattatttatcatctccagatgatatttacgtttcgcaatcgcagattcgtctattcgga
ttaaaaaccggcgatacggttttaggcgaggtacgcccacctaaagaaggtgaaaaatac
ttcccgttaatcaaggtggtaaaaataaatggcctaaaccctaatgtggttcgcgaccgt
gtatcttttgagcatttaacaccgcttttcccccaggaaaaatttaatattgcagataag
caaagtaccatatcaacacgaattatagatttatttgcgcctatcggtaaaggccaacgt
ggtatgatagtatcgcaacctaaaacgggtaaaaccatgttgctaaaagatattgcgaat
gcaattgctgcaaaccatcccgaagtgtaccagattgttctgttaattgatgaacgcccg
gaagaagttaccgatatgcaacgaaatgttagaggcgaggtagttgcatctacttttgat
aaagaggcaactgaacacgttcgcgtagcaaacctggtaattgataaagcaaaaagattg
gtagaatgcggccacgatgtggtaattttgttagattctattacacgtttggcaagagct
tacaacacggtacaacctgcaagcggcaaaattttgagtggtggtgtagatgcaaatgca
ctacataaaccaaaacgcttttttggagctgcccgtaatattgaaaatggaggttcctta
agtataattgctactgcattgaccgagaccggttctaaaatggacgaagtaatttttgaa
gagtttaaaggaactggaaacatggagcttcaattggatagaaaaatttccaaccgacga
attttcccggcgatagatcttacttcatcaagtacacgccgtgatgacttgttgctcgat
gaaaatacaattcagcgaatgtgggtattgcgcaaatatcttgcagacatgaatcctgtt
gaagcaatggagtttattaacgaccgcattaaacaaaccagaaataacgaagagttttta
atttcaatgaatggttaa
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