Aequorivita marisscotiae: QCQ61_09740
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Entry
QCQ61_09740 CDS
T10155
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aequ Aequorivita marisscotiae
Pathway
aequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QCQ61_09740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aequ03019
]
QCQ61_09740
03009 Ribosome biogenesis [BR:
aequ03009
]
QCQ61_09740
Enzymes [BR:
aequ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QCQ61_09740
Messenger RNA biogenesis [BR:
aequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QCQ61_09740
Ribosome biogenesis [BR:
aequ03009
]
Prokaryotic type
rRNA helicases
QCQ61_09740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
WGF91490
UniProt:
A0ABY8KTT9
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All DBs
Position
2169918..2171729
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AA seq
603 aa
AA seq
DB search
MTAFKALGLEEHLLKAIADMGFETPSEVQEKAIPILLDRETDMVSLAQTGTGKTAAFGFP
MLQKIDVNSRTTQGLILSPTRELCLQITNEMVAYGKYMPGLNVTAIYGGASITDQARQIK
KGSQIIVATPGRMKDMIGRGLVDISKIEYCVLDEADEMLNMGFYEDITEILSHSPKDKST
WLFSATMPKEVSTIAKKFMHTPVEITVGTKNVGSDQVTHEYYLVNARDRYNALKRLADAN
PEIFSVIFCRTKRDTQKVAEQLIEDGYNAAAIHGDLSQSQRDTVMKSFRNRQIQMLVATD
VAARGIDVDDITHVINYQLPDEIETYTHRSGRTGRAGKTGISMVIVSKSEVRKIHTIEKM
IQKKFIAKEIPSGMEICEVQMFHLANSIKDTKINPEINAYLPNINEVLADFSKEELIQKV
FSVEFTRFLNYYKNSKDLNISNDRNFSDEDAKDSTRYFVNIGNKDDFDWMSLKDFLRDLL
QLGKDDIYKVDVKDSFSFFNTDTKHQEMVMGIFKDFKLDGRQINVEISKDTGRGGRSSGG
GRDRGKRRGDRSGSDRGNRGDRSGGFKKRSGGRGDKPAFKGKSRRSPDRPDTKGTGGRRR
RKS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacagcatttaaagcactcggcttggaagagcatcttctaaaagccatcgccgacatg
ggttttgaaactccatcggaagtacaagaaaaagcaatcccaattcttttagatcgcgaa
accgacatggtttcgttagcgcagacaggaacgggaaaaaccgcagcatttggtttcccg
atgttgcaaaaaattgacgtaaacagtcgtacaactcagggtttaatcctttcgccaacc
cgcgaactttgccttcagattacaaatgaaatggttgcgtacggcaaatatatgccgggc
cttaacgttaccgctatttacgggggtgccagtataacagaccaagcgcgtcaaattaag
aagggttcgcaaattatagttgccactccgggacgaatgaaagatatgattggccgtggt
ttggttgacatttcaaaaatagaatattgcgtgctcgatgaggccgatgagatgctcaat
atgggcttttatgaagacataaccgaaattctttcgcactcgccaaaagataaaagcacc
tggctttttagcgcaaccatgccgaaagaggtttctacaattgctaaaaagtttatgcac
actcccgtggaaatcacggttggaactaaaaacgttggttcggatcaggttacgcacgag
tattatttggtaaacgctcgcgaccgttacaatgctttaaagcgtttggcagatgcgaac
ccagagatattttcggtaattttttgcagaactaagcgcgacacccaaaaagttgcagaa
caattaatagaagatgggtataacgcggcggcaatccacggagatttaagtcagagtcag
cgcgataccgtaatgaaatccttccgcaatcggcaaatacaaatgctagttgcaaccgat
gtagcagctcgcggaattgatgtggacgatattacccacgttataaattatcagttgccc
gacgaaatagaaacttatacacaccgtagcgggcgtaccggtcgtgcgggaaagacgggt
atttcaatggttatcgtttcaaaaagtgaagtgcgaaaaattcacacaattgaaaagatg
attcaaaagaaatttattgcaaaggaaattccatcgggtatggaaatttgtgaagtgcaa
atgtttcacttggcaaattctattaaggatacaaaaataaatcccgaaattaatgcctac
cttcccaatataaacgaagtattggcagacttttcaaaggaagaacttattcaaaaagtg
ttttccgtagagtttacgcgctttttaaattactataaaaacagtaaagatttaaacatt
tctaacgatcgcaatttttcggatgaagacgctaaagatagtacgcgctacttcgtgaat
attggtaacaaagacgattttgattggatgagtttaaaagatttccttcgcgatttactt
caattgggaaaggacgatatttacaaagttgacgtaaaggatagtttttcattctttaat
acagacaccaagcaccaggaaatggtgatgggtatttttaaggactttaagctagacggc
agacaaattaatgttgaaatatctaaagacaccggtcgcggcggaagaagcagcggaggt
ggaagagatcgtggaaagcgaagaggcgaccgcagtgggagcgaccgcggaaatagaggc
gatagaagcggcgggtttaaaaaacgcagcggcggccgtggagacaaaccagcttttaaa
ggcaaaagccgtagaagccccgatcgtccagatacaaagggaactggcggaagacgcaga
agaaagtcgtaa
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