Aequorivita marisscotiae: QCQ61_11920
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Entry
QCQ61_11920 CDS
T10155
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
aequ Aequorivita marisscotiae
Pathway
aequ02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aequ00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QCQ61_11920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aequ03021
]
QCQ61_11920
Transcription machinery [BR:
aequ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QCQ61_11920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WGF91912
UniProt:
A0ABY8KVN5
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All DBs
Position
complement(2640531..2641397)
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AA seq
288 aa
AA seq
DB search
MRQLKITKQVTNRETKSLNSYLQDVSKIDLITAEEEVELAQRIREGDQAALNKLSRANLR
FVISVAKQYQNQGLSLPDLINEGNVGLVKAAKRFDETRGFKFISYAVWWIRQAILQAIAE
QSRVVRLPLNKIGDINKIKKASIHLEQKFQRVPTAAEIAKELDFSESKVKSSLKNSTRSL
SMDAPFQEGENDNNLYDVLSSGESPNPDKDLMHESLRIEINRALDTLAPREADVVKLNFG
LCGQPPMTLQEIGDTFDLSRERVRQIREKAIRRLRQTSKSHILKKYLG
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaacttaagatcacgaagcaagtaaccaaccgcgaaacaaaatcattaaacagt
tatttacaggatgttagtaaaatagatttaataactgctgaagaggaagttgagttggct
caacgcattcgtgaaggagatcaggcagcgctgaacaagctaagcagagcaaatttaaga
tttgtgatttccgtggcaaaacaatatcaaaatcagggattgagcctccccgatttaatc
aacgaaggaaatgtaggcttggtaaaagccgccaaaagatttgatgaaacacgaggcttt
aagtttatttcctatgcagtgtggtggattcgccaagccattttacaagccatcgccgaa
caatcgcgtgtggtgcgtttgcctttaaacaaaattggcgatataaataaaataaaaaaa
gcatccattcatcttgaacaaaaatttcaacgtgtacccacggcagccgaaattgccaaa
gagctcgattttagtgaatctaaagtaaaaagttcgcttaaaaattcaactcgaagttta
tcgatggacgcgccattccaagagggtgagaacgacaataacctctacgatgtgcttagt
tctggcgaaagtccaaatcctgataaggatttgatgcacgaatcgcttcgcattgaaatt
aaccgagctttagatacactagctccacgcgaggccgatgtggtaaaattaaattttgga
ctttgcggccaaccgccaatgacgcttcaggaaattggagacacttttgatttaagccga
gagcgtgtacgccaaattcgcgaaaaggctattagaagattacgacaaacatcaaaaagc
cacatccttaaaaaatatcttggctaa
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