Aequorivita marisscotiae: QCQ61_12860
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Entry
QCQ61_12860 CDS
T10155
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
aequ Aequorivita marisscotiae
Pathway
aequ03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aequ00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QCQ61_12860 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aequ03019
]
QCQ61_12860 (rny)
Messenger RNA biogenesis [BR:
aequ03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QCQ61_12860 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
WGF92093
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Position
complement(2864258..2865820)
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AA seq
520 aa
AA seq
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MDIITIVISAIVGIALGFLIAKILERNNASQLILRAKKSASAILKEAKSEAEAIKKDKIL
QAKEKFLELKSEHEKVILSRDKKISEAEKRTRDKESVVSSELAKNKKLNAELENKKADYV
ERIAVLEKKQNDVDKAHKSQIEQLEVISSLSAEEAKRQLIESLKDEAKTQSMAFVQTSME
EAKMTAQQEAKKIIINTIQRIGTEEAVENCVSVFNLESDDVKGRIIGREGRNIRAIEAAT
GVEIIVDDTPEAIILSCFDSVRREIARLSLHKLVTDGRIHPARIEEVVEKTTKQIEEEII
EVGKRTVIDLGIHGLHPELIKAVGRMKYRSSYGQNLLHHSREVARLCGVMAAELGLNAKL
AKRAGLLHDIGKVPEMETEMPHALLGMQWAEKYGEKPEVCNAIGAHHDEIEMTGLLSPIV
QVCDAISGARPGARRQVLDSYIQRLKDLEDIAFGFGGVNKAYAIQAGRELRVMVESEKVS
DEKAAQLSFEISQKIQTDMTYPGQVKVTVIRETRAVNIAK
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggacatcataactatagtaatcagtgccatcgttggtattgcacttggctttttaatt
gcaaaaatacttgagcgcaacaacgcatctcaacttattctacgagcaaaaaaaagtgca
tcagcaatactaaaggaagcaaaatctgaagctgaagcaataaaaaaagataaaatatta
caagcgaaagagaaatttttggagcttaaatcggaacatgaaaaggttatattgagccga
gataaaaagatctcagaagcagaaaaaagaacgcgcgacaaggaatcggtagtttctagc
gaactcgctaagaataaaaagttaaacgccgaactggaaaataaaaaagccgattacgtt
gaacgaatcgcagttcttgagaaaaaacaaaacgatgtagataaggcgcataaaagccaa
attgagcaattggaggtaattagcagcctttctgctgaagaagccaaacggcagttaatt
gaaagccttaaggacgaagcaaaaacacagtctatggcatttgtgcaaacttctatggaa
gaggccaaaatgactgcccaacaggaggctaaaaagataattattaacacaatacaacgt
atcggtaccgaagaggccgtagaaaattgcgtttctgtttttaatcttgaaagcgacgac
gttaaaggtagaattattggtcgcgaaggtagaaatattcgcgctattgaagctgccacc
ggggttgagattattgtggacgatacgccggaagcaattatactttcgtgttttgattcc
gtacgtcgtgaaatagccagattgtcacttcacaaattggtcaccgatggccgtattcat
cccgcacgtattgaagaagtagttgaaaaaactaccaaacaaattgaagaagaaattatt
gaagtaggaaaacgtaccgtaatagatttgggaatccacggcctgcatccagagcttatt
aaagctgtgggacgtatgaaataccgctcttcgtacggacagaatttgttgcatcactcc
cgtgaagtagccagactttgcggcgtaatggctgccgaacttggcttaaacgcaaaacta
gctaaaagagccggtttgctgcacgatattggaaaagttcctgaaatggaaaccgagatg
cctcacgcccttttagggatgcagtgggccgaaaaatacggtgaaaaaccagaagtatgc
aacgctattggtgcccaccacgacgaaattgaaatgaccggattgttatcgccaattgtt
caagtgtgcgatgctattagcggggcaagaccgggagcacgacgacaggttttagactcg
tatatacagcgtttaaaagatttggaagatattgcatttggctttggcggcgttaataaa
gcttatgccattcaagcggggcgggaattgcgtgtaatggttgaaagtgaaaaggtaagc
gacgaaaaagccgcacaactttcgtttgaaatatcacagaaaatacaaacggatatgacc
tatcccggccaagtaaaagttacggttattcgtgaaacacgcgccgtaaatattgcgaag
taa
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