Aeromicrobium erythreum: AERYTH_03650
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Entry
AERYTH_03650 CDS
T04236
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aer
Aeromicrobium erythreum
Pathway
aer03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aer00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AERYTH_03650
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aer03021
]
AERYTH_03650
03400 DNA repair and recombination proteins [BR:
aer03400
]
AERYTH_03650
Enzymes [BR:
aer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AERYTH_03650
Transcription machinery [BR:
aer03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AERYTH_03650
DNA repair and recombination proteins [BR:
aer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AERYTH_03650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SLATT_2
YlqD
FemAB
Motif
Other DBs
NCBI-ProteinID:
ALX03858
UniProt:
A0A0U4D6M4
LinkDB
All DBs
Position
741724..745569
Genome browser
AA seq
1281 aa
AA seq
DB search
MLDVNFFDQIRIGLATADDIRGWSYGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITHVDEEARHRDLSSLESKIDLEVKQLEARRDDEVNQRLQKLEED
LKALEDEGAKADAKRKVKDAAEREAKQRRDRIQREIDRLTEVWDRFKNLKVQDLEGDEML
YREMTYRFGAYFEGYMGAAAIQKRLQSFDLDAEAESLREIIATGKGQKKTRALKRLKVVS
AFLGSSNHPEGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMAIELFKPFVMKRLVDLNHAQNIKSAKRMVERGV
RAEVWDVLEEVITEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQIHPLVCSAFNADFDGD
QMAVHLPLSAEAQAEARILMLSTNNILKPSDGRPVTMPTQDMIIGLYFLTLEREGHPGEG
RAFSSVAEAVMAFDRKEITLQSKVRIRIPGVDGVVASRETTLGRAIFNQALPDDYAYVNY
QVGKKELGVIVNDLAERYSKIDVGVALDNLKETGFHWATRSGVTISIEDVVTPETKQEIL
TKYEGQAAKVQQQFDRGLITEDERRQELIEIWTQATAEVSGEMEKKFTANADNPIWMMVH
SGARGNMMQVRQIAAMRGLVANPKGEIIPRPIKANFREGLSVVEYFIATHGARKGLADTA
LRTADSGYLTRRLVDVSQDVIIREEDCGTERGLPKVIATRLDDGTFVPAENVETSAYSRS
AATDITHPETGEVLVEAGGDLGDVEIGQLVTAGVETIRVRTVLTCEAAAGTCAKCYGRSL
ATGKLVDIGEAVGTIAAQSIGEPGTQLTMRTFHTGGVAGDDITHGLPRVVELFEARQPKG
RAPITESAGRVAIDDTDKTRKLVVTPDDGSEVQEYPVSKRSRLLVEDGSHVEVGQQLTHG
TPDPQEVLRILGVRRAQEHLVDEVQEVYRSQGVAIHDKHIEIIVRQMLRRVTVIEQGDSH
LIPGDLADRATFESENRRVVAEGGTPASGRPVLMGITKASLAVESWLSAASFQETTRVLT
DAAIHGKSDSLRGLKENIIIGKLIPAGTGLDRYRNIRVEPTEEARQAAYAVTGYESYDYG
FGSPDGPAVQLEDYDFTSYEP
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtgaacttcttcgatcagatccggatcggtctcgcgaccgccgacgacatc
cgcggatggtcctacggcgaggtcaagaagccggagacgatcaactaccgcacgctcaag
cccgagcgtgacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggcaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgctgcggcgtc
gaggtgacccgctccaaggtgcgtcgcgagcgcatgggccacatcgagctcgctgcgccg
gtcacccacatctggtacttcaagggtgtccccagccgcctcggctacctgctcgacctc
gccccgaaggacctcgagaaggtcatctacttcgcggcgtacatgatcacgcacgtcgac
gaggaggcgcgtcaccgcgacctgtcctcgctggagtccaagatcgacctcgaggtcaag
cagctcgaggcccgtcgtgacgacgaggtcaaccagcgcctgcagaagctcgaggaggac
ctcaaggccctcgaggacgagggtgcgaaggccgacgccaagcgcaaggtcaaggacgcc
gccgagcgtgaggccaagcagcgtcgcgaccgcatccagcgcgagatcgaccgcctcacc
gaggtctgggaccgcttcaagaacctcaaggtccaggacctcgagggcgacgagatgctc
taccgcgagatgacgtaccgcttcggtgcgtacttcgagggctacatgggcgccgctgcc
atccagaagcgtctgcagtccttcgacctcgacgccgaggcggagtcgttgcgcgagatc
atcgccaccggcaagggccagaagaagacccgcgccctcaagcgactcaaggtcgtctcg
gcgttcctcggcagcagcaaccaccccgagggcatggtcctcgacgccgtgccggtgatc
ccgccggagctgcgtcccatggtccagctcgacggtggccgcttcgccacgtcggacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgctcgacctc
ggcgcgcccgagatcatcgtcaacaacgagaagcggatgctgcaggaggccgtcgactcg
ctgttcgacaacggccgtcgcggtcgccccgtcacgggcccgggcaaccgtccgctcaag
tccatctcggacatgctcaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtcgtcggcccgcagctgaagctgcaccag
tgcggtctgcccaagcagatggcgatcgagctgttcaagcccttcgtcatgaagcgtctg
gtcgacctcaaccacgcccagaacatcaagtccgccaagcggatggtggagcgcggcgtg
cgcgccgaggtctgggacgtgctcgaggaggtcatcaccgagcacccggtgctgctgaac
cgtgcacccaccctgcaccgtctgggcatccaggcgttcgagccgcagctcatcgagggc
aaggccatccagatccacccgctcgtctgctcggccttcaacgccgacttcgacggtgac
cagatggccgtgcacctgccgctgagcgccgaggcgcaggccgaggcccgcatcctcatg
ctgagcacgaacaacatcctgaagccgtccgacggccgtccggtcaccatgccgacgcag
gacatgatcatcggcctgtacttcctcacgctcgagcgcgagggacacccgggcgagggt
cgtgcgttcagctcggtcgccgaggccgtcatggccttcgaccgcaaggagatcaccctc
cagagcaaggtgcggatccgcatccccggcgtcgacggtgtcgtggcgtcgcgggagacc
accctcggtcgcgcgatcttcaaccaggccctgccggacgactacgcgtacgtcaactac
caggtcggcaagaaggagctcggggtcatcgtcaacgacctcgccgagcgctactccaag
atcgacgtgggcgtcgcgctcgacaacctcaaggagaccggtttccactgggccacgcgc
tcgggcgtcaccatctccatcgaggacgtcgtcacgccggagaccaagcaggagatcctc
accaagtacgagggtcaggcggcgaaggtccagcagcagttcgaccgcggtctcatcacc
gaggacgagcgtcgtcaggagctcatcgagatctggacccaggccacggccgaggtgtcc
ggtgagatggagaagaagttcaccgcgaacgccgacaacccgatctggatgatggtccac
tcgggtgcgcgaggcaacatgatgcaggtccgtcagatcgcggccatgcgtggtctcgtg
gcgaacccgaagggcgagatcatcccccgcccgatcaaggcgaacttccgtgagggcctc
agcgtcgtcgagtacttcatcgcgacgcacggtgcccgcaagggtctggccgacaccgcc
ctgcgcaccgccgactccggctacctgacgcgtcgactcgtcgacgtcagccaggacgtc
atcatccgcgaggaggactgcggcaccgagcgtggtctgccgaaggtcatcgcgacccgc
ctggacgacggcacgttcgtgccggcggagaacgtcgagacctcggcgtactcgcgcagc
gcggccaccgacatcacccacccggagacgggcgaggtgctggtggaggccggcggcgac
ctcggcgacgtcgagatcggccagctcgtgaccgccggcgtggagaccatccgcgtccgc
acggtcctgacctgcgaggcggcagccggtacgtgcgccaagtgctacggccgctcgctg
gccaccggcaagctcgtcgacatcggcgaggcggtcggcaccatcgccgcccagtcgatc
ggtgagcccgggacccagctgacgatgcgtaccttccacaccggtggtgtggccggtgac
gacatcacgcacggtctgccgcgcgtggtcgagctcttcgaggctcgtcagcccaagggt
cgtgcgccgatcaccgagtccgccggtcgcgtcgcgatcgacgacacggacaagacgcgc
aagctcgtcgtcacccccgacgacggctcggaggtgcaggagtaccccgtcagcaagcgt
tcgcgcctgctcgtcgaggacggctcgcacgtcgaggtcggccagcagctcacccacggc
acgccggacccgcaggaggtcctgcgcatcctcggtgtccgtcgggcgcaggagcacctc
gtggacgaggtccaggaggtctaccgcagccaaggcgtggcgatccacgacaagcacatc
gagatcatcgtgcggcagatgctgcgtcgggtcacggtcatcgagcagggtgactcccac
ctgatccccggtgacctcgcggaccgggcgacgttcgagtcggagaaccgacgcgtcgtc
gccgagggcggcacccccgcctcgggccgtccggtgctcatgggcatcacgaaggcctcg
ctggccgtcgagtcgtggctgtcggccgcctccttccaggagacgacccgcgtcctcacg
gacgccgccatccacggcaagtcggactcgctgcgcggtctgaaggagaacatcatcatc
ggcaagctcatcccggcgggcaccggtctcgaccggtaccgcaacatccgggtcgagccc
accgaggaggcccgccaggccgcctacgccgtcacgggctacgagtcctacgactacggc
ttcggctcgcccgacggccccgccgtccagctggaggactacgacttcacgtcgtacgag
ccctga
DBGET
integrated database retrieval system
