Aeromicrobium erythreum: AERYTH_04250
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Entry
AERYTH_04250 CDS
T04236
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
aer
Aeromicrobium erythreum
Pathway
aer03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aer00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AERYTH_04250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aer03019
]
AERYTH_04250
03009 Ribosome biogenesis [BR:
aer03009
]
AERYTH_04250
Messenger RNA biogenesis [BR:
aer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AERYTH_04250
Ribosome biogenesis [BR:
aer03009
]
Eukaryotic type
Pre-60S particles
RNases
AERYTH_04250
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALX03966
UniProt:
A0A0U4C7P4
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All DBs
Position
complement(878104..878736)
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AA seq
210 aa
AA seq
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MNDRLVWIDCEMTGLSLETDALVEVAALVTDYELNVLGQGVDLVIKPPAQALEQMNDVVT
RMHTASGLITELEAGTTLRDAEEQVLAYVREHVKEPRKAPLAGNTVGTDRTFLARDMVEL
EGFLHYRVIDVSSIKELARQWFPRAYFAAPAKAGHHRALADIAESIDELRYYRRAVFVGD
PGPETEAARALAAEVAASSTLGRLEGSEES
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacagactggtgtggatcgactgcgagatgaccgggctctccctcgagaccgac
gcgttggtggaggtggcggcgctcgtcaccgactacgagctcaacgtgctggggcagggc
gtcgacctcgtcatcaagcccccggcgcaggcgctggagcagatgaacgacgtggtgacg
cgcatgcacaccgcctccgggctgatcaccgagctcgaggccggcacgacgctgcgcgac
gccgaggagcaggtgctcgcctacgtccgcgagcacgtgaaggagccgcgcaaggcgccg
ctcgcgggcaacacggtcggcaccgaccggacgttcctcgcccgcgacatggtcgagctg
gagggcttcctgcactaccgcgtcatcgacgtgtcgtcgatcaaggagctcgcccgccag
tggttcccccgtgcctacttcgcggctcccgcgaaggccgggcaccaccgtgcgctggcc
gacatcgccgagagcatcgacgagctgcgctactaccgccgcgccgtcttcgtcggcgat
cccgggcccgagacggaggcggcccgcgcgctcgccgccgaggtcgcggccagctcgacc
ctcggccgtctggagggctccgaggagtcgtga
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