Aeromicrobium erythreum: AERYTH_05905
Help
Entry
AERYTH_05905 CDS
T04236
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aer
Aeromicrobium erythreum
Pathway
aer03420
Nucleotide excision repair
aer03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AERYTH_05905
03430 Mismatch repair
AERYTH_05905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aer03400
]
AERYTH_05905
Enzymes [BR:
aer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AERYTH_05905
DNA repair and recombination proteins [BR:
aer03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AERYTH_05905
MMR (mismatch excision repair)
Other MMR factors
AERYTH_05905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALX04268
UniProt:
A0A0U4CNL5
LinkDB
All DBs
Position
1231788..1234934
Genome browser
AA seq
1048 aa
AA seq
DB search
MSLVRDAQHLRDLVGIPFSEPQVAAITAGLDRPGAIIAGAGSGKTTVMAARVLWLVGHLG
VAPERILGLTFTNKAAAELGQRIRASLEHLPADPGDPWGDVTASTYHAFAGSLITEHGLR
LGIEPDLQVVTDASRFQRMARVISAYDRELRFIGTHVPTLVGQVMALDSQLSEHLVSPEQ
LRQHDAAVVAEFEAVGKPALLRDAALTALKRSELSLLVEAYRVAKAADGVMDFSDQMAWG
AQLAQLPEVRAAMLERYDVVLLDEYQDTSVAQRDLLQALFSGLPVTAVGDPAQGIYGWRG
AATGNLEEFLDDFPAADGSRGRQFALVETRRCAPEVIAAANHLAQPFYASSSVVSPLVSA
ADLTGRVDVALHRTVDEEIAALVAGVVAEHDAGRPWADIAVLVRVARENGEIVKALRDAH
VPFEIVGLAGLLVQPEVLDVVSLLEVVEDVTANPAVLRLLAGPRWNVGPRDLALLGRRAA
TLSGRAHGAQDDATLAEELARAVEGTDPTEVVSLAEALDDPGDLPYDPRALERFADLSRV
VHRVRAHVGEPLLDLARRAVRALDLDVELEAGDVEGASDNLATFLDAVADYGATDRYASL
TGLVTYLRAESEFNEGMEVTTPSEADSVKLLTIHRSKGLEWGAVFVPLVSSSVFPSGRGR
PSWLTNGSALPTSLRGDAASLPDLAEWTPTAGKELRAASREADLLEELRLGYVAYTRAKE
HVVVSGHWWGRTQLKPLGPSDFLLTTRDWLAEQGIDPLHWAEPPADDETNPHLVLADGIA
WPVEPPALDGRRALAAEVLAALDGGGTPVPELPVPGDRVAELSLEIDLLLAEAEAAQAEA
RPVELPSTLSATAVLALAQDESSFARTLARPMPRQPSGAARFGTRFHAWVESHYGQRPLL
EPTELPGQGDVELADDAELADVIERFESGPYGHRTPHTIEAPFSMLLAGQQVVGRIDAVF
ATTTPAGRGFEVVDWKTSRQADADPLQLSLYRLAWAELQGLDPALVSGAFYYVRLGTVVR
YAPEDLLDREALEALLAPGTGPGPNLAG
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgtccgcgacgcgcagcacctgcgcgacctcgtcggcatcccgttcagcgag
ccgcaggtcgccgccatcaccgccgggctcgaccgcccgggcgccatcatcgccggggcc
gggtcgggcaagacgacggtcatggcggcgcgggtgctgtggctcgtcggccacctcggc
gtggcacccgagcggatcctcggcctgaccttcaccaacaaggcggccgccgagctggga
cagcggatccgggcgagcctggagcacctgcccgccgacccgggcgacccgtggggcgac
gtcacggcctcgacgtaccacgcgttcgccgggtcgctcatcaccgagcacggcctgcgg
ctcggcatcgagcccgacctgcaggtcgtcaccgacgcgtcgcggttccagcggatggcc
cgcgtgatctccgcctacgaccgcgagctgcgcttcatcggcacccacgtgcccacgctg
gtcggccaggtgatggcgctggactcccagctgtccgagcacctcgtcagccccgagcag
ctgcgccagcacgacgccgccgtcgtcgcggagttcgaggcggtcggcaagccggcgctg
ctgcgcgacgccgcgctgaccgcgctcaagcgcagcgagctcagcctcctcgtggaggcc
taccgcgtcgccaaggccgccgacggcgtcatggacttctccgaccagatggcctggggc
gcccagctcgcgcagctgccggaggtccgggccgccatgctcgagcgctacgacgtcgtc
ctgctcgacgagtaccaggacacctccgtcgcccagcgcgacctgctgcaggcgctgttc
tccgggctccccgtcacggccgtcggcgaccccgcgcaaggcatctacggctggcgcgga
gcggccaccggcaacctcgaggagttcctcgacgacttcccggccgccgacggcagccgg
ggtcgccagttcgccctcgtggagacccgacgctgcgcgccggaggtcatcgcggccgcc
aaccacctggcgcagccgttctacgcgtcgtcgtcggtggtctccccgctcgtctcggcc
gccgacctgaccgggcgcgtcgacgtcgcgctgcaccgcaccgtcgacgaggagatcgcc
gcgctcgtcgccggggtcgtcgccgagcacgacgccggccgaccgtgggccgacatcgcg
gtcctcgtacgggtggcccgcgagaacggcgagatcgtcaaggcgctgcgcgacgcgcac
gtgcccttcgagatcgtcggcctggcggggctgctcgtgcagcccgaggtgctcgacgtc
gtctccctgctcgaggtcgtcgaggacgtcaccgccaaccccgcggtgctccggctgctg
gccgggccgcgctggaacgtcggaccccgcgacctcgcgctgctcggtcgacgtgccgcg
acgttgagcggacgcgcgcacggcgcccaggacgacgcgacgctcgccgaggagctggcc
cgcgcggtcgagggcaccgaccccaccgaggtcgtctcgctcgccgaggcgctcgacgac
cccggcgacctgccctacgacccccgcgcgctcgagcgcttcgccgacctctcgcgggtg
gtgcaccgcgtccgggcgcacgtgggcgagccgctgctcgacctcgcgcgtcgggccgtc
cgcgcgctcgacctcgacgtcgagctcgaggccggcgacgtcgagggtgcgtccgacaac
ctcgcgacgttcctcgacgccgtggccgactacggggccaccgaccgctacgcctcgctc
acgggcctggtgacctacctgcgggcggagtcggagttcaacgagggcatggaggtcacg
acgccctcggaggccgactcggtcaagctgctgaccatccaccgctccaagggcctggag
tggggcgcggtgttcgtgcccctcgtgtcgagcagcgtgttcccgtccggtcgtggccgg
ccgagctggctgacgaacggcagcgcgctgccgacgtcgctgcgtggcgacgcggcgagc
ctgcccgacctcgcggagtggacgccgaccgcgggcaaagagctgcgcgcggcgagccgc
gaggccgacctgctcgaggagctccgcctcgggtacgtcgcctacacccgcgccaaggag
cacgtggtcgtgagcggccactggtggggacgcacccagctgaagccgctcggaccgtcg
gacttcctgctcaccacgcgcgactggctcgccgagcaggggatcgacccgctgcactgg
gccgagcctcccgccgacgacgagaccaacccgcacctcgtgctggccgacgggatcgcg
tggccggtggagccaccggctctcgacgggcggcgagcgctcgccgcggaggtcctggcc
gccctcgacgggggcgggacgccggtgcccgagctgccggtccccggcgaccgcgtggcc
gagctgtccctcgagatcgatctcctcctcgccgaggccgaggcggcgcaggccgaggcg
cgtcccgtcgagctgccgtccacgctgtcggcgacggcggtgctggccctggcgcaggac
gagtcgtcgttcgcgcgcaccctggcgcggccgatgccgcgccagccctcgggcgccgcc
aggttcggcacccggttccacgcctgggtcgagtcgcactacggccagcgacctctgctg
gagcccaccgagctgccgggacagggcgacgtcgagctcgccgacgacgccgagctggcc
gacgtcatcgagcggttcgagtcgggcccgtacggacaccgcacgccgcacacgatcgag
gcgcccttctcgatgctgctggccggccagcaggtggtcggccgcatcgacgccgtcttc
gccacgaccacgccggccggccgtggcttcgaggtggtcgactggaagacgagccgacag
gccgacgccgacccgctgcagctcagcctgtaccggttggcgtgggccgagctccagggt
ctcgaccccgcactcgtctcgggcgcgttctactacgtgcgtctcggcacggtggtgcgg
tacgcacccgaggacctgctcgaccgtgaggctctcgaggcgctgctcgcgcccgggacc
ggacccgggcctaacctggcagggtga
DBGET
integrated database retrieval system
