Aeromicrobium erythreum: AERYTH_11135
Help
Entry
AERYTH_11135 CDS
T04236
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aer
Aeromicrobium erythreum
Pathway
aer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AERYTH_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aer03019
]
AERYTH_11135
03400 DNA repair and recombination proteins [BR:
aer03400
]
AERYTH_11135
Enzymes [BR:
aer01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AERYTH_11135
Messenger RNA biogenesis [BR:
aer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AERYTH_11135
DNA repair and recombination proteins [BR:
aer03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AERYTH_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HVO_A0261_N
HEM4
WHD_DprA
Motif
Other DBs
NCBI-ProteinID:
ALX05219
UniProt:
A0A0U3KK70
LinkDB
All DBs
Position
complement(2364431..2366560)
Genome browser
AA seq
709 aa
AA seq
DB search
MTTSTATATDALDALRRLTGRPDAQFHDGQLEAITALVDDHRRALVVQRTGWGKSAVYFV
ATSLLRARGTGPTLLVSPLIALMRDQVAAAARAGVRAVSISSANAHEWDDVRARLDADDV
DVLLVSPERLTNPRFRDEQLPELRRRIGLLVVDEAHCISDWGHDFRPDYRRLADLIDSMP
DGVPVLATTATANQRVVTDVEEQLGASGPGVPGDADVLTLRGSLARTSLRLGSLRLPSSK
ERLGWLVSHLAELPGSGIVYTLTVSAAEDLARLLTEAGHEVAAYTGRTDPDERVRLEQAL
KDDQLKALVATSALGMGFDKPNLGFVVHLGAPSSPVAYYQQVGRAGRATESADVLLLPGP
EDADIWRYFATASMPTQAKVDAVLGALGSTPMSVAALEAQVDIRRTPLELLLKVLDVDGA
VRRVQGGWVSTGEPWVYDAERYERIAQAREAEQEAMLEYQAGRTCRMELLQRQLDDPTAA
PCGRCDVCAGPWYPTSTDGEAVARATQSLDRVGVPVDPRAQWPSGVGRLGVDVSGRIPPA
ERPETGRVVARLTDLGWGGTLRELFATGAPDVAVPEPLLGACARALRDWPWAERPVAVVA
MPSVARPTLVASVAEGLARLGRLPLLPPLQLAPGAPPATQGGNSAFRLAAVWGRFVVPDD
LRQALDGLSGPVLLVDDLVDSRWTMAVASRELRLAGADAVLPFALGSVE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctccaccgccaccgccaccgacgcgctcgacgccctgcgtcgcctcaccggc
cgacccgacgcccagttccacgacgggcagctcgaggcgatcacggccctggtcgacgac
caccggcgcgcgctcgtcgtccagcgcaccggctggggaaagtcggcggtctacttcgtc
gcgacctcgctgctgcgcgcgcggggcaccggccccacactcctggtgtccccgctcatc
gccctcatgcgcgaccaggtggccgccgccgcgcgcgccggggtgcgggccgtctcgatc
agctcggccaacgcgcacgagtgggacgacgtgcgggcccggctcgacgccgacgacgtc
gacgtgctgctggtgtcgcccgagcgcctcaccaacccgcggttccgcgacgagcagctg
cccgagctgcgccgccgcatcggcctgctcgtcgtcgacgaggcgcactgcatctccgac
tggggccacgacttccggcccgactaccgacgcctggccgacctcatcgactcgatgccc
gacggggtgccggtgctggccaccaccgccaccgccaaccagcgggtcgtcaccgacgtc
gaggagcagctgggtgcctccgggcccggcgttccgggcgacgcggacgtcctcacgctg
cgtggctcgctggcgcgcacgagcctgcgtctgggctctctgcggctgcccagctccaag
gagcggctcggctggctggtctcgcacctcgccgagctgccgggcagcggcatcgtctac
accctcacggtctcggcggccgaggacctcgcgcggctgctcaccgaggcggggcacgag
gtggcggcctacacgggacgcaccgaccccgacgagcgcgtgcggctcgagcaggcgctg
aaggacgaccagctgaaggccctcgtcgccaccagcgcgctcggcatgggcttcgacaag
cccaacctgggcttcgtcgtgcacctcggggcgccgtcctcgcccgtcgcgtactaccag
caggtcggccgcgcgggccgcgccacggagtccgccgacgtcctgctgctgcccgggccg
gaggacgccgacatctggcgctacttcgcgacggcgtcgatgccgacgcaggccaaggtc
gatgcggtgctcggggccctgggcagcacgccgatgtcggtcgctgcgctggaggcgcag
gtcgacatccgtcgcacgccgctcgagctgctgctcaaggtgctcgacgtcgacggtgcc
gtgcgccgcgtacagggcggctgggtcagcacgggcgagccgtgggtctacgacgcggag
cggtacgagcgcatcgcgcaggcgcgcgaggccgagcaggaggcgatgctcgagtaccag
gccggtcgcacctgccggatggagctgctgcagcgccagctcgacgacccgaccgccgcg
ccctgcggccgctgcgacgtgtgcgcaggcccctggtacccgacgagcaccgacggcgag
gccgtcgcgcgggccacgcagtccctcgaccgcgtgggcgtgcccgtcgacccgcgggcg
cagtggccgtccggcgtcggccggctcggggtcgacgtgtcggggcgcatcccgcccgcg
gagcggcccgagaccggtcgggtggtcgcacgactcaccgacctcggttggggcggcacg
ttgcgcgagctgttcgccacgggcgcgcccgacgtcgccgtgccggagcccctgctgggt
gcctgtgcgcgtgcgctgcgcgactggccctgggcggagcggccggtggcggtcgtcgcg
atgccctcggtcgcgcgacccacgctggtcgcctcggtggccgaggggctcgcgcgactg
ggccgactcccgctgctgccgcccctgcagctggcgccgggcgcaccccccgccacgcag
ggaggcaacagcgcgttccggctcgcggctgtgtgggggcggttcgtcgtgcccgacgac
ctgcggcaggcgctggacgggctctccggtccggtcctgctcgtcgacgacctcgtcgac
agccgctggacgatggccgtggcgtcgcgcgagctgcgcctcgccggggccgacgcggtg
ctgccgttcgcgctcggctcggtcgagtag
DBGET
integrated database retrieval system
