Aeromonas sp. CA23: CK910_01845
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Entry
CK910_01845 CDS
T10911
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
aero Aeromonas sp. CA23
Pathway
aero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK910_01845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aero03019
]
CK910_01845
Enzymes [BR:
aero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK910_01845
Messenger RNA biogenesis [BR:
aero03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK910_01845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ATL97365
UniProt:
A0AAU8WVN3
LinkDB
All DBs
Position
complement(393665..394885)
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AA seq
406 aa
AA seq
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MTFSELDLNPALLAALPASLHTPTRIQQLAIPVVLAGQDLLALAQTGSGKTLAFGLPLLQ
RLDPASSLVQGLVLVPTRELATQVSAALQGVAEALGLRVLTLCGGVAQERQQAELALGPQ
LLVATPGRLRDLLTQQALGLDGLQQLVLDEADRLLEMGFWPDIQWLMNEMPAERQTLLFS
ATLPAELDELATGLLTEPTRIEANPLNSLVNEIEERLYLVNKSSKVPALISLLKEQAWPQ
VLVFISARDDADGVARKLARAGIPVAALHGEKEQAVRDQALDDFKAGKVRVLVATDLMAR
GIHVEALPLVINLDLPASAPVYVHRIGRTARAGREGLAISLVCHGESDTLVAIRTLTGRE
LPLAELAGFPVTDLPASGEGKRPPRDKQANRRTANKRSVKQFKGKA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacctttagcgaactcgacctcaatcccgccctgctggcggccctgcctgccagcctg
cacaccccgacccgcatccagcagcttgcgatacccgtggtattggcggggcaggatctg
ctggcgctggcccagaccggcagcggcaagacgctggcattcgggctgccgctgctgcaa
cgactggatcccgcctccagtctggtgcaggggctggtgctggtgccgacccgcgagctg
gccacccaggtgagcgccgccttgcaaggggtcgccgaggcgctggggctgcgcgttttg
accctgtgcggcggcgtggcacaggagcggcaacaggccgagctggcgctggggccgcaa
ctgctggtggcgacgccggggcggctgcgggatctgctcactcagcaagcgctggggctg
gatggcctgcaacagctggtgctggatgaggcggatcgcctgctggagatgggcttctgg
cccgacatccagtggctgatgaatgagatgcccgccgagcgtcagaccctgctcttctcc
gccaccctgcctgccgagctggatgagctggcgaccggcctgctgacagagccgacccgc
atcgaggccaatcccctcaacagcctggtgaacgagatcgaggagcggctctatctggtc
aacaagagcagcaaggtgccggcgctgatcagcctgctcaaggagcaggcctggccgcag
gtactggtcttcatcagcgcgcgggacgatgccgacggcgtggccaggaagctggccagg
gcggggatcccggttgccgccctgcatggcgagaaagagcaggcggtgcgggatcaggcg
ctcgacgatttcaaggccggcaaggtgcgggtgctggtggccaccgacctgatggcgcgg
ggcatacacgtggaggcgctgccgctggtgatcaacctggacctgcccgccagcgccccc
gtctatgtgcaccgcatcggccgcaccgcccgcgccgggcgcgaggggctggccatttcg
ctggtgtgccacggcgagagcgataccctggtggcgatccgcaccctcaccggccgtgag
ttgccgctggcggaactcgccggcttcccggtgaccgacctgcccgccagcggggagggc
aagcgccccccgcgggacaagcaggcaaaccgccgtaccgccaacaagcgcagcgtcaag
cagttcaagggcaaggcctga
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