Aeromonas sp. CA23: CK910_02335
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Entry
CK910_02335 CDS
T10911
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
aero Aeromonas sp. CA23
Brite
KEGG Orthology (KO) [BR:
aero00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aero03009
]
CK910_02335
Enzymes [BR:
aero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
CK910_02335
Ribosome biogenesis [BR:
aero03009
]
Prokaryotic type
rRNA helicases
CK910_02335
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
P-loop_SecA
Cas3-like_C_2
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ATL97456
UniProt:
A0AAU8X1Z3
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All DBs
Position
503899..505278
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AA seq
459 aa
AA seq
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MNNSEFSSLNLSPALLENLASLGYLQMTPIQAQSLPLVLDGKDLIAKAKTGSGKTAAFAL
GLLSRLNVNRVDVQALVLCPTRELADQVAQEIRRLARALPNVKLVTLCGGTPTAPQSATL
GFGAHIAVGTPGRILKHLEQGTLELSSLETLVLDEADRMLDMGFGEDINKVISHAPERRQ
TLLFSATYPEGIAQMSRGVQRNPVEVSVESLHEGSAIEQKLYEVPAGQRLDALTWLLSHY
QPSSCVVFCNTKRACNDVADHLAAKGFSALALNGDLEQRERDQVLVRFANGSATILVATD
VAARGLDIKELGAVINFELTYDPEVHVHRIGRTGRAGQQGLALSLYQPNEAQRVNFIEEY
QQAPIPQGDLAEIGREIKPIAPLMATLSIDAGRKTKVRAGDILGALTGEGGIAGADVGKI
QISEQYSYVAVKRSVASAALKRLQEGKIKGRTYRARKLG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaacagcgaatttagcagcctcaacctctcccccgccctgctcgagaacctcgcc
agtctgggttatctgcagatgaccccgatccaggcccagagcctgcccctggtgctcgat
ggcaaagatctgatcgccaaggcaaaaaccggcagcggcaagacggccgccttcgccctg
ggtctgctctcccggcttaacgtcaaccgcgtcgatgtgcaggcgctggtgctctgcccg
actcgcgaactggcggatcaggtggcccaggagatccgtcgtctggcccgcgccctgccg
aacgtcaagctggtgaccctgtgtggtggcaccccgaccgcgcctcagtccgccactctg
ggcttcggtgcccacatagccgtcggcacccctggccgcattctcaagcacctggaacag
ggcaccctggagctgtccagcctggagacgctggtgctggacgaagcggatcgcatgctg
gacatgggctttggcgaagacatcaataaagtcatcagccatgcgcccgagcgccgccag
accctgctgttctccgccacctatccggagggcatagcccagatgagccgcggcgtgcag
cgcaacccggtcgaggtgagcgtggagtccctgcacgaaggcagcgccatcgaacagaag
ctgtatgaagtgccggccggccagcgcctcgacgccctgacctggctgctgagccactac
cagccgagctcctgcgtggtgttctgcaacaccaagcgggcctgcaacgacgtggccgat
catctggccgccaagggcttctcggcgctggcgctgaacggcgacctggaacagcgcgag
cgggatcaggtactggtgcgctttgccaacggcagcgccaccatactggtggccaccgac
gtggccgcccgtggtctggacatcaaggagctgggcgccgtcatcaacttcgagctgacc
tatgaccccgaggtgcacgtgcaccgcatcggtcgtaccggtcgcgccggccagcagggt
ctggccctgagcctgtatcagccaaacgaggcccagcgcgtcaactttatcgaggagtac
cagcaagctcccatcccgcaaggggatctggccgagattggccgcgagatcaaaccgatc
gcgccgctgatggccaccctctccatcgatgcgggccgcaagaccaaggtgcgggccggt
gacatcctgggcgccctgaccggcgaaggcggcattgccggggccgatgttggcaagatc
cagatctccgagcagtactcctacgtggcggtgaagcgcagcgtggcgagcgctgccctc
aagcggttgcaggaaggcaagatcaaggggcgcacctaccgcgcccgcaaactgggttaa
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