Aeromonas sp. CA23: CK910_05015
Help
Entry
CK910_05015 CDS
T10911
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
aero Aeromonas sp. CA23
Pathway
aero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK910_05015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aero03019
]
CK910_05015
Enzymes [BR:
aero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK910_05015
Messenger RNA biogenesis [BR:
aero03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK910_05015
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ATL97924
LinkDB
All DBs
Position
complement(1066846..1068135)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKTHLTTEKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKT
IAFLAATFNYLLTHPLTNPRLVNQPRAIIMAPTRELAVQIYNDADSIAASTGLKLGLAYG
GEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIR
FLFRRMPAPTERLSMLFSATLSLRVQELAYEHMNHPEHVQVEPEQMTGVRIKEELFYPSN
EDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILE
DFTKGTLDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLA
CEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVVRNRQPVNRNMRDRQGGGNSN
NRRRPPRKS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttaacgaccgaaaaattcgcccaaatgggcctcgaacccgaagtt
ctggctggtctggaatcaaagggatttcactattgcacgcccatccaggcactgtctctg
ccactgctggtagaaggccatgacctcgccggtcaggcccagacaggaaccggcaagacc
attgccttcctggccgcgacattcaactatttgctgacccacccgctgaccaatccccgt
ctggttaaccaacccagagccatcataatggcacccacccgggaactggcagtacagatc
tacaacgatgccgacagcatagccgcctctaccggcctcaagcttggcctcgcctacggc
ggcgaaggttacgacaagcagctggccgtgctggagcagggcgtcgacatcctgatcggc
accacgggccgcatcatcgactacttcaagtccaaggtcatcgatctgagcaacattcag
gtcgtggtactggacgaagcggatcgcatgttcgatctgggcttcatcaaggacatacgt
ttcctgttccgccgcatgccggcgccgaccgagcggctgagcatgctgttctccgccacc
ctctccctgcgggtgcaggagctggcctacgagcacatgaaccacccggaacacgtgcag
gtggagcctgagcagatgacgggcgtgcgcatcaaggaggagctgttctacccctccaac
gaagacaagatgctgttgttgctctccctgatggaagaagagtggccggaaaaggccatc
gtcttcgccaacaccaagcatgtctgtgaagacgtgcatgcgtggctggagaatgacggc
caccgcgtcggtctgctgaccggtgacgtgccgcagaagaagcggatgaagatcctggaa
gacttcaccaaggggacgctggacatcctggtcgccaccgacgtggccgcccgtggtctg
cacatcccggacgtgacccacgtcttcaactacgacctgcccgacgacgccgaggactat
gtacaccgtatcggtcgtaccggtcgtgccggcaagagcggtcactccatcagcctggcc
tgtgaagactatgccttcaacctgccggccatagaggagtacatccaccacccgatcccg
gtcagcaagtatgaccgcgaggcgctgctggatgacgtgaccgcaccgaaacgggtcgtt
cgcaaccgtcagccggtgaaccgcaacatgcgggatcgccagggcggtggcaacagcaac
aaccgtcgtcgtccgccgcgcaagagctga
DBGET
integrated database retrieval system
