Aeromonas sp. CA23: CK910_10555
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Entry
CK910_10555 CDS
T10911
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aero Aeromonas sp. CA23
Pathway
aero03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aero00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CK910_10555 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aero03019
]
CK910_10555 (pnp)
03016 Transfer RNA biogenesis [BR:
aero03016
]
CK910_10555 (pnp)
Enzymes [BR:
aero01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CK910_10555 (pnp)
Messenger RNA biogenesis [BR:
aero03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CK910_10555 (pnp)
Transfer RNA biogenesis [BR:
aero03016
]
Prokaryotic type
tRNA degradation factors
CK910_10555 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
CsrA
KH_SLS1_2
KH-I_KHDC4-BBP
AAA_lid_3
Motif
Other DBs
NCBI-ProteinID:
ATL98864
UniProt:
A0AAU8X267
LinkDB
All DBs
Position
2218659..2220800
Genome browser
AA seq
713 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLTSRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PLVSPDIVAMIGASAALAISGIPFGGPIAAARVGYMNGQYVLNPTTAELPQSDLDLVVAG
TANAVLMVESEAAILSEETMLGAVVYGHEQMQVVINAINEFAAEVGTQPWDWTPPATNEA
LKAKVAELATAELGEAYRITEKAVRYAAIGAIKSRVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVGTGILPRAHGSALFTRGETQAIVVATLGTERD
AQNIDELAGHRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSAAEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTQGITALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRSEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRISAVA
NEAAMEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADFLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAPVADVAVAEEPTAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccggt
gtgatggcccgtcaagccactgcggccgtaatggtcagcatggacgatacctgcgtattt
gtgaccgtagtaggcaagaaagaggccgatcacggtcgcgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgaaaccctcacctcccgcctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtaatgtccgtgaac
ccgctggtttccccagacatagttgccatgatcggtgcctctgctgcactggccatctcc
ggcatcccgttcggtggcccgattgccgcggctcgcgtgggttacatgaacggtcagtac
gtattgaacccgaccacagccgaactgccccagagtgatctggacctggtggttgccggt
accgccaacgcggtactgatggtcgaatccgaagcggccatcctgtctgaagagaccatg
ctgggcgccgtcgtttatggccacgagcagatgcaagtcgtgatcaacgccatcaacgaa
ttcgccgccgaggtgggtacccagccgtgggattggaccccgcctgcgaccaacgaagcg
ctgaaagccaaggttgccgagctggccaccgccgagctgggtgaagcttaccgcatcacc
gagaaggccgtgcgttacgccgccatcggtgccatcaagtcccgtgtggttgagcaagtg
atcgcctccggcgtggaagaagatgccaagaagatcggcgaagagttccacagcctggaa
agccgcatcgtccgtggccgtgtggtccgtggcgagccgcgcatcgatggtcgcgatccg
gaaatgatccgtgccctgtccgttggcaccggcattctgccgcgcgcccatggctccgcc
ctgttcacccgtggtgagactcaggccatcgtggttgcgaccctgggtaccgagcgtgac
gcccagaacatcgacgagctggctggccaccgtgccgaccgcttcatgctgcactacaac
ttcccgccgtactgcgtcggcgagaccggcatgatgggcagccccaagcgtcgtgagatc
ggtcatggtcgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgccgagttc
ccgtacgtggtgcgcgtggtttccgagatcaccgaatccaacggttcctcctccatggcc
tccgtctgtggttcctccctggcgctgatggacgcgggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatc
ctgggtgacgaagatcacctgggcgacatggacttcaaggtggctggtaccactcaaggt
atcacagcgctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gccctcaagcaagcccgtggtgctcgcctgcacatcctgaaagtgatggacgaagccatc
caggcgccgcgtagcgaaatctccgacttcgccccgcgcatccacaccatcaagatcaat
cctgagaagatcaaggacgtgatcggcaagggtggttccgtgatccgcgcgctgaccgaa
gagacaggcaccaacatcgagctggatgatgacggtaccgtccgcatctccgccgttgcc
aacgaagccgccatggaagccattcgtcgcatcgaggccatcaccgccgagatcgaagtg
aaccgcatctatgaaggcaaggttgtgcgtctggccgacttcggcgccttcgtcaatatc
ctgccgggtaaagacggtctggtacacatctcccaaatcaccgatgcccgtgtgcagaac
gtggccgacttcctgaagatcggtgatgttgtgaaggtgaaggtactggaagtggaccgt
caaggccgcgtgcgtctctccatcaaggaagcgaatgcaccgaccgaagccgccgcaccg
gttgctgacgtggctgttgccgaagagccgactgccgaataa
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