Aeromonas sp. CA23: CK910_14275
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Entry
CK910_14275 CDS
T10911
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aero Aeromonas sp. CA23
Pathway
aero03018
RNA degradation
Brite
Enzymes [BR:
aero01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CK910_14275
Messenger RNA biogenesis [BR:
aero03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CK910_14275
Ribosome biogenesis [BR:
aero03009
]
Prokaryotic type
rRNA helicases
CK910_14275
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
ATL99506
UniProt:
A0AAU8X4I2
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Position
3045422..3047302
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AA seq
626 aa
AA seq
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MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQVLVLAPTRELALQVAEACQRYAKHMPDFHVLPIYGGSSYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMEQCP
STRQVALFSATMPDQIRRVAQKHLKQPKEIKIITKTSTAPTIRQRYWQVTGLHKLDAMTR
LLEVEPYEAVLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEHATRQAIEPMKMPSTEDINQHRMTKFKERIRETMMGEELEIYHNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDESIPEPQFSPSNDRGGRDFERRDGGRDFADRGDRPARRMP
SLEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRFIGNIDIADDFSTV
DLPKGMTADVLEVIKKARVCQRPLMITRYTEVPAGSNTAPRPPRSDRPFNKDRRPSGDRP
FNKSGERREGGFNKDRKFGGNKRRDS
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcctgtattg
aaagcgctgcaggacgtgggctatgagcgcccgtcaccgatccaggccgcagcaattccc
cacctgatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcttttgccttgcctctgttgtctcgtctggaagctggtaaccgcaatacccaggttttg
gtgctggcaccgacccgtgaactggcgctgcaggttgccgaggcgtgccaacgttacgcc
aagcacatgccggacttccatgtcctgcccatctacggtggttcctcttacgaaacccag
acccgcgccctgcgccgtggtgcccaggttgtcgtgggtacccctggccgtgtgatggat
ctgatccgccgcaagaacctggacctctccggcctgaaagccctggttctggacgaagcc
gatgaaatgctgcgtatgggcttcatcgacgacgtggactggatcatggaacagtgcccg
agcactcgtcaggtcgcgctcttctctgccaccatgccggaccagatccgtcgtgttgcc
cagaagcacctgaagcagccgaaagagatcaagatcatcaccaagacgtccactgcaccg
actatccgccagcgttactggcaggtaaccggtctgcacaagctggacgccatgacccgt
ctgctggaagtcgagccgtacgaagccgtactggtcttcgtgcgcaccaagaacgcggcc
gaagagctggctggcaaactggccgcccgtggtcacgcctgtgaagcgctgcacggtgac
atcccgcagaagctgcgtgagcgcaccgtcgacaagctgcgtcaaggccagctggacatc
ctgatcgccaccgacgttgtcgcccgtggtctggacgttgagcgcatcactcacgtggtg
aactacgacattccgtacgataccgaatcctacgtacaccgtatcggccgtaccggccgt
gctggtcgcaagggtgaggccatcctgtttgttgctccccgtgagcgccgcatgctgcgc
gccatcgagcacgccactcgtcaggccatcgagccgatgaagatgccgagcaccgaggac
atcaaccagcaccgcatgaccaagttcaaagagcgcatccgggaaaccatgatgggcgaa
gagcttgagatctaccacaacctggtgaacgagctgatcgaagaagattctgccgatccg
ctggagctggctgccgcactggccaagctggtgcagggtgaccaaccgctgctgctggat
gagtccatccctgagccgcagttcagcccgagcaacgatcgtggtggccgtgacttcgaa
cgccgtgacggtggtcgtgacttcgccgaccgtggtgatcgtcctgcccgtcgcatgccg
tccctcgagccgcgtccgctgaaagacaatcctgatgtagagatggagcgttaccgcgta
gacgtgggtgcccatcacggcgtcaagccgggccagatcgtgggcgccatcgccaacgaa
gcgaacatcgagagccgtttcatcggcaacatcgacatcgccgatgacttctccaccgtc
gatctgcccaagggcatgaccgccgacgtactggaagtgatcaagaaagcccgtgtttgt
cagcgtccgctgatgatcacccgctacaccgaagtgccggccggcagcaacactgccccc
cgtcctccgcgcagcgatcgtcctttcaacaaggatcgccgccccagcggtgaccgtccg
ttcaacaagagcggggagcgccgtgaaggtggcttcaacaaggatcgcaagttcggtggc
aacaagcgccgcgacagctaa
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