Aeromonas sp. 1805: E5E96_00720
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Entry
E5E96_00720 CDS
T10912
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aerz Aeromonas sp. 1805
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aerz03400
]
E5E96_00720
DNA repair and recombination proteins [BR:
aerz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5E96_00720
Archaeal homologous recombinant proteins
E5E96_00720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
ABC_tran
ABC_ATPase
Hormone_1
MMR_HSR1
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QJT15953
LinkDB
All DBs
Position
complement(167024..170776)
Genome browser
AA seq
1250 aa
AA seq
DB search
MKILSLSGENLASLTGQFTIDFAGGALGAAGLFAITGNTGAGKSTLLDAICLALYDEMPR
FIANRKNVAEVGRMDDEEKLKANDVRGILSRGHASGFAEVQFRGCDGRIWLARWAVRRAR
NRAEGRFQAQERSLTDVASGQVFSGSKRELQDRIDELVGLSWEQFRRAVILPQGEFAAFL
KSSADERSALLERMTGTELYSAISVQTHERAREEQQKLAAISQRLGDVALMDEATREQWV
SQQVSLATSLKHEQQQQQLMQDLRDLNGRIAAQLQACQEGEAALAVAEAAHAAAAPEREE
FARAEQAQVARADHDELARLTLEVQQQEKALAELGPELGKLEEQTQQSALTEQQLLAEKI
AAEREWGALQPELKRAQELDTRIREKQQQLQKIQQEGAQEREVQLTLEQGWRQQRQQVEQ
LKAQHLQWGAWLEEHKELAPVARQWQPLLTAMQDWAEDADRLQQLLTLREHKLRALRQLQ
HQLEQGQQERDYWLREQERLQQQQHELQEQQWEGRLAKAQEQWQGQTEQLGQLRQLLELA
DYGRNHGEQHGRLQQEIAQLEQALGKLAILGDELTPARERLALQRDEARHALEQSRAIAS
FEQHRHILRDGEPCPLCGAEEHPYHQSQPQVAGILGQLAERVRSLELEWERLNHQYIQCE
SERQELARQLAVRQQHLPELETRAEQLTQRWQQLGGAELLGHPLPLRQSPIEWNELMSTL
LGRGQSLEQGLARSQQQLREAQLGQQQLQAVRQQLSQLASQHQQFEQQWQEADRHRIALE
GEVKAMGEQETTLRQRLEQGGNRLDEQMGGQPWRQWLGSQQWHEWQRACEAWLHGQSEWE
RLTGEIASLTPALSAQEARLQTQRELLHKLERDYKEHEQQRQGLVTSRATCLEGEEIALV
ESSWQQRLQQLASELETMQGAARTLRERQTELKTRLSHLEQEKQVSSRRRREVLGRWAAH
ASSLGIAEYDLRRLLAMSPDELKARRAALQALEDARAEARTRLTERQRALALEESKRDRY
REHHPELAALAPQELASRLTALEAHCRALDEQLFQCKSMLAQAEAATLKAGTLQEELAAQ
QAVADHWQRLSDLIGSASGAKLRTFAQSLTLERLLLEANAQLAELSPRYRLERVPGTDLA
LQVVDLDMGDEVRSVDSLSGGESFLVSLALALALSSLSSRQTQVESLFIDEGFGTLDPDS
LDLALSSLDSLQAAGRQIGVISHVQTLVERIGVQVRVEALGGGESRVVLP
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctctctttgagtggtgagaacctcgccagcctgaccggtcaattcaccatc
gattttgccggtggcgccctgggggccgccggcctgtttgccatcaccggcaataccggc
gccggcaagagcaccctgctcgatgccatctgtctggcgctctacgacgagatgccgcgc
tttatcgccaatcgcaagaacgtggccgaagtgggccgcatggatgacgaggagaagctc
aaggccaacgacgtgcgcggcatcctcagccgcggccacgccagcggttttgccgaggtg
cagtttcgcggctgtgacggccgcatctggctagcccgctgggcggtacgccgggcccgc
aaccgcgccgaggggcgctttcaggcccaggagcgcagcctgaccgacgtggcgtcgggc
caggtgttcagtggcagcaagcgggagctgcaggatcgcatcgacgagctggtggggctc
tcctgggagcagtttcgccgcgccgtcatcctgccgcagggggagtttgccgccttcctc
aaatcgagcgccgacgagcgttcggccctgctcgaacggatgaccggcaccgagctctac
tccgccatttcggtccagacccatgagcgggcgcgggaggagcagcagaaactggccgcc
atcagccagcggctcggcgacgtggcgctgatggacgaggcgacccgcgagcagtgggtg
agccagcaggtcagcctcgccaccagcctcaaacacgagcagcagcaacagcagctgatg
caggacttgcgcgatctcaacggccgcatcgccgcccagttgcaggcctgtcaggaggga
gaggcggcccttgccgtggccgaagcggcccacgctgcggccgccccggagcgcgaggag
ttcgcccgcgccgagcaggcccaggtggcccgcgccgatcacgacgagctggcccgcctc
accctggaggtgcagcagcaggagaaggcgctggccgagcttggtcccgaacttggcaag
ctggaggagcagacccagcagagcgccctcaccgagcagcaactgctggcggagaagatc
gccgccgagcgcgagtggggcgccctgcagcccgaactcaagcgggcgcaggagctcgac
acccgcattcgggaaaaacagcagcagttgcagaagatccagcaggagggggcgcaggag
cgggaggtgcagcttactctggaacagggctggcgccagcagcgccagcaggtggagcag
ctcaaggcccagcacctgcagtggggcgcctggcttgaggagcacaaggagctggcgccg
gtggcccgccagtggcagcccctgctcaccgccatgcaggattgggccgaggatgccgac
aggctgcagcagctccttaccctgcgcgaacacaagctgcgcgccctcaggcaactgcaa
caccagctggagcaggggcagcaggagcgcgactactggctgcgcgagcaggagcggctg
cagcagcaacagcacgagctgcaggagcagcagtgggaggggcgtctggccaaggcgcag
gagcagtggcaagggcagaccgagcagctgggtcagctgcgccagctgctggagctggcc
gactatggccgcaatcacggcgagcagcatggtcgcctgcagcaggagatcgcccagctg
gagcaggcgctcggcaagctggccatcctcggcgacgagctgacgccagcccgcgagcgg
ctcgccctgcagcgggacgaggcgcgccatgcgctggagcagtcccgcgccatcgccagt
ttcgagcagcatcgccacatcctgcgcgacggtgaaccttgtccgctctgcggcgccgag
gagcacccctatcaccagagccagccgcaggtggcgggcattctggggcaactggcggag
cgtgtccgcagcctggagctcgagtgggagcggctcaatcaccaatacattcagtgcgag
agcgagcgccaggagctggcccgccagctggcggtgcgccagcaacatctgcctgaactg
gagacgcgcgccgagcagctgacccagcgctggcagcagctgggcggtgccgagctgctg
ggccatccgctgccgctgcgtcagagcccgatcgagtggaacgaattgatgagtaccctg
ctcggtcgcggccagagtctggagcaggggctggcccgcagccagcagcagctgcgcgag
gcccagctcggtcagcagcagttgcaggccgtgcgccagcagctgagccagctggccagc
cagcaccaacagttcgagcagcagtggcaggaggccgatcgccatcgcatcgccctggaa
ggggaggtgaaggcgatgggcgagcaggaaacgactctgcgccagcgccttgagcagggg
ggcaaccggctcgacgagcagatgggaggccaaccctggcgtcagtggctgggtagccag
cagtggcacgagtggcagcgggcctgcgaggcctggctgcacggtcagagcgagtgggag
cggctgaccggcgagattgccagcctcaccccggccctgagcgctcaggaggcgcgtctg
cagacccagcgtgagctgctgcacaagctcgagcgcgactacaaggagcatgaacaacag
cggcaggggctggtcaccagccgtgccacctgtctggagggcgaggagattgccctggtc
gagagcagctggcagcagcggctgcagcagctggccagcgagctggagacgatgcagggg
gcggcccgcaccttgcgcgagcgtcagaccgagctcaagacccgtctcagccatctggag
caggagaagcaggtgagcagccggcggcgacgggaggtgctggggcgctgggcagcccac
gccagcagcctcggcatcgccgaatatgacctgcgccgcctgctggccatgagcccggat
gagctcaaggcgcgccgcgccgccttgcaggcgctggaggatgcccgcgccgaggcgcgt
acccgtttgaccgagcggcagcgggcgctggcgctggaggagagcaagcgggatcgttac
cgcgagcatcaccccgagctggccgcgttggcgccacaggagctagccagccggctgacg
gcgctggaggcgcactgccgcgccctcgacgagcagctattccagtgcaagagcatgctg
gcacaggccgaggcggcgaccctcaaggcgggcaccttgcaggaggagctggccgcccag
caggcggtggcggatcactggcagcggctctccgaccttatcggctcggccagcggcgcc
aagctgcgcaccttcgcccaaagtctcacgctggagcggttgctgctggaggccaacgcc
cagctcgccgagctctccccccgctatcggctggagcgggtgcccggcaccgatctggcg
ctgcaggtggtggatctcgacatgggggatgaggtgcgctcggtggactccctctccggt
ggtgaaagcttcctggtgtcgctggcgctggcgctggccctctccagcctgtcgtcgcgc
cagacccaggttgaatcgttgttcatcgacgagggtttcggcaccctcgatcccgacagc
ctggatctggcgctctcaagccttgactccctgcaggcggccggccgccagatcggggtt
atctcccacgtgcagaccctggtggagcggatcggcgtgcaggtgcgggtggaggccctc
ggcggaggtgaaagccgggtggtgttgccctga
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