KEGG   Aeromonas sp. 1805: E5E96_04490
Entry
E5E96_04490       CDS       T10912                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
aerz  Aeromonas sp. 1805
Pathway
aerz02024  Quorum sensing
aerz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aerz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E5E96_04490 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E5E96_04490 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aerz03019]
    E5E96_04490 (hfq)
   03036 Chromosome and associated proteins [BR:aerz03036]
    E5E96_04490 (hfq)
Messenger RNA biogenesis [BR:aerz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     E5E96_04490 (hfq)
Chromosome and associated proteins [BR:aerz03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    E5E96_04490 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM Iec3-like_M
Other DBs
NCBI-ProteinID: QJT16617
LinkDB
Position
943470..943832
AA seq 120 aa
MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIKLEGTISGFDQYSVLLT
DAHGNQQLVYKAKISTIAMHSGRPQVSIQRARKPRVSMAPRPHGAPGRYDDNQGGGSSEQ
NT seq 363 nt   +upstreamnt  +downstreamnt
atgacaactgaatccccaagctactccacgattgagcaagccttctccctcgggaacggg
caagattctgccctcaactggttgcgcaagaatcgcagtcaggtcgccatcttcttggtg
agcggcatcaagctggaggggaccatcagcggtttcgaccagtacagcgtgctgttgacc
gatgcccacggcaaccagcagctggtctacaaggccaagatttccaccatcgccatgcac
tccggccggccgcaggtcagcatccagcgtgcccgcaaaccccgcgtctccatggcgccg
cgcccccacggcgcgcccggtcgttatgacgacaaccagggcggcggtagcagcgagcag
taa

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