Aeromonas sp. 1805: E5E96_04490
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Entry
E5E96_04490 CDS
T10912
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
aerz Aeromonas sp. 1805
Pathway
aerz02024
Quorum sensing
aerz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5E96_04490 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
E5E96_04490 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aerz03019
]
E5E96_04490 (hfq)
03036 Chromosome and associated proteins [BR:
aerz03036
]
E5E96_04490 (hfq)
Messenger RNA biogenesis [BR:
aerz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E5E96_04490 (hfq)
Chromosome and associated proteins [BR:
aerz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
E5E96_04490 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Iec3-like_M
Motif
Other DBs
NCBI-ProteinID:
QJT16617
LinkDB
All DBs
Position
943470..943832
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AA seq
120 aa
AA seq
DB search
MTTESPSYSTIEQAFSLGNGQDSALNWLRKNRSQVAIFLVSGIKLEGTISGFDQYSVLLT
DAHGNQQLVYKAKISTIAMHSGRPQVSIQRARKPRVSMAPRPHGAPGRYDDNQGGGSSEQ
NT seq
363 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgaatccccaagctactccacgattgagcaagccttctccctcgggaacggg
caagattctgccctcaactggttgcgcaagaatcgcagtcaggtcgccatcttcttggtg
agcggcatcaagctggaggggaccatcagcggtttcgaccagtacagcgtgctgttgacc
gatgcccacggcaaccagcagctggtctacaaggccaagatttccaccatcgccatgcac
tccggccggccgcaggtcagcatccagcgtgcccgcaaaccccgcgtctccatggcgccg
cgcccccacggcgcgcccggtcgttatgacgacaaccagggcggcggtagcagcgagcag
taa
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