Aeromonas sp. 1805: E5E96_05670
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Entry
E5E96_05670 CDS
T10912
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aerz Aeromonas sp. 1805
Pathway
aerz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E5E96_05670 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aerz03400
]
E5E96_05670 (recB)
Enzymes [BR:
aerz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E5E96_05670 (recB)
DNA repair and recombination proteins [BR:
aerz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E5E96_05670 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QJT16817
LinkDB
All DBs
Position
complement(1174880..1178497)
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AA seq
1205 aa
AA seq
DB search
MANPLNTLRFPLYGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGADAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFMRGESKDALLSQLLAEVEDHELAARR
LLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWRSEFY
PVDKPLASAVRALWPSPAALLREMGSWLDNSELEMRPPAGDETLAARHQAAMARIEAVKR
EWLAQGDEIRRQTDGQVSRYTGKNYEGWLAKIADWAQDEHSGYAIPKELERFGQTVLEEN
LKKGGAVPTLPLFSQIDALLASRPGIRDLILQRAAKVVRSRMQASKRQAHQLSFDDLLKD
LDGALGSGLGERLCERIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHTDTALLMIGDPKQ
AIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSRALVAAVNGLFERAKDPFIYEADIPFL
PVEAQGKSKALQLDGDAAPVLHCWQLSGQPTFNKGDYQSKMARATAVEIHRLLTQASAGK
AQIGDQPVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLAQVEAREILLILH
ACQNPGEERSLRAALATGLFDLDAKALDELASDERAWESAVQEFMEYRKIWHKRGVLAML
RALLHRRNLASSLLASPNGERRLTNFLHLGELLQQVSCELDGEYALLRWLGEAASRPDGQ
DAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRAADTPLFHEADGAGNRTVLD
LTGAEASLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRSGNGKSEQTDLHQTAIGY
LLQKGEEGDAQTLATALTELAQALPGVAVGEPSLTRPAPMTAEEEQLGEPQVRHFTGTLE
RDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAAALAADLSTAQQEEAPQPSIFTFP
KGARPGTLLHSLFETIDFQSAGGEPLAQHIATLLAQDGFDESWAQVLQQQVETVLDTPLE
TGFGEPVRLRDLAPERKQVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGM
LKGFIDLVFEWQGRWYLLDYKSNHLGMSPADYSRPALERAMAEHRYDLQYQLYSLALHRL
LTLRLPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVLGLDRLFGEGAAPALAGVSD
NGVEV
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccgctcaataccctgcgttttcccctctatggcgagcggctgatcgaggcc
tccgccggtaccggcaagacctacaccatcgccggtctctacctgcgcctgctgctgggc
cacggcccgctcattgaagaaggcgccgatgccggtcaacccagcgcccacgagcggccg
ctctcggtgaccgagatcctggtggtgacctttaccgaggcggctaccgccgagctgcgt
ggccggatccgcgcccgcatccacgaggcacgcctcgccttcatgcgcggtgagagcaag
gacgccctgctgagccagctgctggcggaggtggaggatcacgagctggcggcccgccgc
ctgctggctgccgagcggcagatggacgaggcggcggtcttcaccatccacggcttctgc
cagcggatgctgaaacagaacgccttcgagtcgggcgctctctttgaaaccgaatttctc
accgacgacagccagctcaggctgcaggcggtgagcgactactggcgatccgagttctat
ccggtggacaagccgctcgccagcgccgtgcgtgcgctctggccgagccccgccgccctg
ctgcgggagatgggcagctggctcgacaacagcgagttggagatgcgcccgccggcgggg
gacgagaccctcgccgcccgccatcaggcggccatggcccgcattgaggcggtgaagcgt
gaatggctggcgcaaggggacgagatccgccgccagacggatgggcaagtaagccgctac
accggcaagaactacgaaggctggctcgccaagatagccgactgggcgcaggacgagcac
agcggctacgccattcccaaggagctggagcgcttcggccagacggtgctggaggagaac
ctcaagaaggggggcgcagtgccgactctgccgctgttcagccagatcgatgcgttgctg
gcgagtcgccccggcattcgggatctcatcctgcaacgggcggccaaggtggtgcgcagc
cggatgcaggccagcaagcggcaggcccatcagctctcgttcgatgacctgctcaaagac
ctcgacggcgcgctcggctccggccttggcgagcggctgtgcgagcgcattcgcgccacc
taccgggtggcgatgatcgacgaatttcaggataccgacccccagcagtaccgcatcttc
caccgtctttacggcggccacacagacacggcgctgctgatgatcggtgaccccaagcag
gccatctacggctttcgcggcgccgacatttttacctacattcaggcgcggcgaaatgtg
agcgcccactacaccctcgggcgcaactggcgctccagccgcgcgctggtggcggcggtc
aacggcctgttcgagcgggccaaggatccctttatctacgaggcggatatccccttcctg
ccggtggaggcgcagggcaagagcaaggcgctgcagctggatggtgacgccgctcccgtg
ctccactgctggcagctgagcggccagcccaccttcaacaagggggattaccagagcaag
atggcccgcgccacggcggtggagatccaccgcctgctgacccaggccagcgcgggcaag
gcgcagatcggcgatcagccggtgaaagcgggcgatatcgccgtgctggtgcgcaccggc
gccgagggcaagctggtgcagcaggagctggcgcggctcgccatcgcctccgtctacctg
tcgaatcgcgagagcgtgctggcgcaggtggaggcgcgggaaattttgctcattctgcac
gcctgtcagaacccgggtgaggagcgcagccttagggcggcgctcgccaccgggctgttc
gatctggacgccaaggcgctcgacgagctcgccagtgacgagcgggcgtgggagagcgcg
gtgcaggagtttatggagtaccgcaagatctggcacaagcgcggcgtgctggccatgctg
cgcgccctgctgcaccggcgcaatctcgcctcctccctgctggcgagcccgaacggcgag
cggcggctgaccaacttcctccacctcggcgagctgctgcaacaggtgagctgcgagctg
gacggcgaatatgccctgctgcgctggctgggggaggcggcgagtcgccccgatggccag
gatgcggagcaggtactgcgcctcgaatccgagcgcaagctggtgcagatcgtcaccatc
cacaaatccaaggggctggagtacccgctggtgttcctgccctttatctgcagccaccgc
gctgccgataccccgctgttccacgaagcggacggggcgggcaatcgcaccgtgctcgat
ctcaccggcgccgaggcgtccctggccgaggccgaccgcgagcggcttgccgaagatttg
cggctgctctacgtggcgctgacccggggcgtctacgccacctggctggggctggcgccg
gtgcgctccggcaatggcaagtcggagcagaccgacctgcaccagaccgccatcggctac
ctgctgcaaaagggcgaggagggggatgcgcagacgctggcgactgccctgaccgagctg
gcgcaggcgctgcccggggtggccgtcggtgagccctcgctcactcgcccggcccccatg
acggcggaggaggagcaactgggcgagccgcaggtgcgccactttaccggcacccttgag
cgggactggtggatcagttcctactccgggctggcggcgcaggggcacggtcacagcaag
ggcgtgctggccaaccccggcttcgatgacgaggtcgtcaccgaggcggccgcattggct
gccgacctgtctacagcacaacaggaagaggcaccccagccttccatctttaccttcccg
aaaggggcgcgccccggcaccctgctgcacagcctgttcgagaccatcgattttcaaagc
gccggcggcgagccgctggcgcagcacattgccaccctgttggcgcaggatggcttcgac
gagagctgggcccaagtgctgcaacagcaggtggagacggtgctcgatactccgttggag
acaggctttggcgagccggtgcggctgcgggatctggcccccgagcgcaaacaggtggag
ctggagttcttcctgcccatggggcgggtgacggcaccggcgttgaccgcgctctgtcag
cagcacgacccgttgtcgcggggcaacaagccactcagctttgccaccgtgcaggggatg
ctcaagggctttatcgatctggtgttcgagtggcaggggcgctggtatctgctcgactac
aaatccaaccacctcggcatgagccccgccgattacagccgtccggcgctggagcgggcg
atggcggagcaccgctacgacctgcaataccagctctactcgctggcgctgcaccggctg
ctcaccttgcgcctgccgggttacgacttcgagcagcactttggcggcgttttctatctg
ttcctgcgcggcatgccgcaggggggcattttccatacccgccccagtcgtgaactggtg
ctggggctggatcggttgtttggcgagggggcggcgcccgccctcgccggggtatcggat
aacggggtagaagtatga
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