Aeromonas sp. 1805: E5E96_06455
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Entry
E5E96_06455 CDS
T10912
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aerz Aeromonas sp. 1805
Pathway
aerz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5E96_06455 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aerz03019
]
E5E96_06455 (recQ)
03400 DNA repair and recombination proteins [BR:
aerz03400
]
E5E96_06455 (recQ)
Enzymes [BR:
aerz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5E96_06455 (recQ)
Messenger RNA biogenesis [BR:
aerz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5E96_06455 (recQ)
DNA repair and recombination proteins [BR:
aerz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5E96_06455 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QJT16960
LinkDB
All DBs
Position
complement(1343465..1345300)
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AA seq
611 aa
AA seq
DB search
MTAIAETLPDPQPENPLALLQAVFGYQQFRPGQLEIIEQIVAGRDALVLKPTGGGKSLCY
QIPALLRPGLGVVVSPLISLMKDQVDSLRANGVAAVYINSALSREEMIQNFAAMRRGEIK
IVYVSPERLLQHEFMDRLAELPLGLFAIDEAHCVSQWGHDFRPEYAALGRLKQWFPQVPV
VALTATADEATRSDMLHRLELHDPFIHTASFDRPNIRYSLVEKFKAAEQLLRYVQSQKGN
CGIVYCSSRNRVEEVAERLSRHGCKAAPYHAGLPLELRQRTQESFLKDDIEIVVATVAFG
MGIDKPNVRFVVHYDIPKNIESYYQETGRAGRDGTPAEALLLYDPADIGRVRRLLDNIEN
PQQLQVEQYKLNVMAAFAEAQTCRRQVLLNYFGEYNDKPCGNCDICLDPPQSYDGTEDAQ
KALSCVWRVGQNFGVGYVVEVLRGSLNQRIKDHGHDKLSTYGIGKDQSHEYWMSVIRQLI
HKGLLTQNITRNLVLQLTEAARPVLRGEVKLDLAVPRLQPISSRKEKRNGLLDNANYDKR
LFKELRALRKQIAEDEEVPPYVVFNDATLVEMAQLMPMTEAEMLAVNGVGHRKLERFGEA
FMDLIIDYCRR
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccattgccgaaaccctgcctgacccccagccagagaatccgcttgccctgctg
caggcggtgttcggctatcagcaattccggccgggccagctcgaaatcatcgagcagatc
gtggcggggcgcgatgcgctggtgctcaagcccaccggcggcggcaagtcgctctgctat
cagatccctgcgttgttgcgccctgggctcggggtagtggtctctcccctcatttcgctg
atgaaggatcaggtggacagcctgcgcgccaacggcgtggcggcggtctacatcaactcg
gccctcagccgggaggagatgatccagaattttgccgccatgcggcgcggcgagataaaa
atcgtctatgtctcccccgaacgcctgctgcagcacgagttcatggatcggctggccgag
ctgccgctcggcctgtttgccatcgacgaggcgcactgcgtctcccagtgggggcacgat
tttcggccggaatacgcggcgctgggccgactcaagcagtggttcccgcaggtgcccgtg
gtggcgctcaccgccaccgccgacgaggcgacccgcagcgacatgctgcatcggctggaa
ctccacgaccccttcatccacaccgccagctttgacagacccaatatccgctacagcctg
gtggagaaattcaaggcggcggagcagctgctgcgctatgtgcagagccagaagggcaac
tgcggcatcgtctactgctccagccgcaatcgggtggaggaggtggccgagcggctctcc
cgccacggctgcaaggcggcgccctatcacgccggcctgccgctcgagctgcgccagcgc
actcaggagtccttcctcaaggacgacatcgagatagtggtggcgacggtggcgttcggc
atgggcatcgacaagcccaacgtgcgcttcgtggtgcactacgacattcccaagaacatc
gagtcctactatcaagaaaccggccgggccggccgcgacggcaccccggccgaggcgctg
ctgctctacgatcctgccgacatcggccgggtgcgccggctgctcgacaacattgaaaac
ccccagcagttgcaggtggagcagtacaagctcaacgtgatggcggccttcgccgaggcg
cagacctgccggcgccaggtgttgctcaactacttcggcgagtacaacgacaagccgtgc
ggcaactgcgacatctgcctcgaccccccccagagctatgacggcaccgaagatgcccag
aaggcgctctcctgcgtctggcgggtggggcagaacttcggggtgggttatgtggtggag
gtgctgcgcgggtcgctgaaccagcgcatcaaggatcacggccacgacaagctgtcgacc
tacggcatcggcaaggatcagagccacgagtactggatgagcgtgatccgccagctgatc
cacaaggggttgctgacccagaacatcacccgcaatctggtgctgcagttgaccgaggca
gcccgtcccgtgctgcgcggcgaggtgaagctggatctggcggtgccgcgcctgcagccc
atctccagccgcaaggagaagcgcaacggcctgctcgacaacgccaactacgacaagcgg
ctgttcaaggagctgcgcgccctgcgcaagcagatcgccgaggatgaagaggtgcctccc
tacgtggtgttcaacgacgccaccctggtcgagatggcgcagctgatgccgatgaccgag
gcggaaatgctggcggtcaacggcgtgggtcaccgcaaactggaacgcttcggcgaagcc
tttatggacctgatcatcgactactgccgtcggtaa
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