Aeromonas sp. 1805: E5E96_10030
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Entry
E5E96_10030 CDS
T10912
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aerz Aeromonas sp. 1805
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aerz03016
]
E5E96_10030
Enzymes [BR:
aerz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
E5E96_10030
Transfer RNA biogenesis [BR:
aerz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
E5E96_10030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
CSD2
S1
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
QJT17587
LinkDB
All DBs
Position
complement(2083872..2085893)
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AA seq
673 aa
AA seq
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MFQDNPLLAQLKQQIRENIPKKEGVIRASDRGFGFLEVDEKTSYFVPPPYMKKVMHGDRV
SALIRTEKEKEVAEPDALLEQSVTRFVARVKMFRDRLNVVADHPLIKDAIKARVKKGLDE
KEFKEGDWVVATLKRHALVDGNFSAEITQKIASQDDHNVPWWVVLARHNLAQVEPADLPE
WKVIEEEELPRTDLTATPFFTIDGAKTKDMDDALAIRKLDNGWELLVAIADPTAYVAEGS
ELDKEAAQRAFTVYMPGRNVPMIPRTLSDELCSLKEGEERNTLCARLRIAEDGLLLEETE
FFAARISSHARLTYDDVSDWAEHGKQLDIDAGVLAQLPLMKAMTEARIAWRTEHALVFPD
RPDYDFELGENGEVLAIHVEPRRIANRMVEESMIAANICAGRVLGKQVGYGIFNVHTGFD
EESLDGAIDLLKSAEAPFEKEEIASLTGFCALRRWIDNLDTRWLDGKIRRFQSYALMSAE
PGAHYGLGLDAYATWTSPIRKYGDMVNHRLLKAVIAGKTPGERPSLELTEHLTACRRLHR
MVERDIGDWLYVRYLKADAGTDKVFNAEIIDVMRAGLKLRLRENGAVVFMPARHILDNKD
RLECNWDNGRVYLDKTEVVYELGQIIEVKLTEAVEETRSLIAKPAVELVPGPAPVAPTSE
ADAAPTDEAPKAE
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctgctggcccagctcaagcaacaaatccgcgaaaacatcccc
aagaaagagggtgtgatccgcgcctctgatcggggcttcggcttcctggaggtcgatgag
aagaccagctatttcgtgccgcctccctacatgaagaaggtgatgcacggtgaccgggtg
agcgccctgatccgtaccgaaaaagagaaggaagtggccgagccggatgccctgctggag
cagtccgtcacccgtttcgtggcccgcgtcaagatgttccgcgaccgcctcaacgtggtc
gccgatcacccgctgatcaaggatgccatcaaggcccgcgtcaagaaggggctggacgag
aaagagttcaaggaaggggactgggtggttgccaccctcaagcgtcacgccctggtggac
ggcaacttctctgccgagatcacccagaagatcgcctcgcaggacgatcacaacgtgccc
tggtgggtggtgctggctcgccacaacctggcccaggtcgagccggcggatctgccggag
tggaaggtgatcgaagaggaagagctgccgcgcaccgatctgaccgcgacccccttcttc
accatcgacggcgccaagaccaaggacatggacgatgccctggccatccgcaagctggac
aacggctgggagctgctggtggccatcgccgacccgaccgcctacgtggccgagggcagc
gagctggacaaggaagccgcccagcgcgctttcaccgtctacatgccgggccgcaacgtg
ccgatgatcccgcgcaccctctccgacgagctctgctccctgaaagagggcgaggagcgc
aacaccctgtgcgcccgtctgcgcatcgccgaggacggcctgctgctggaggagaccgag
ttcttcgctgcccgcatcagctcccacgcccgtctcacctatgacgacgtctccgactgg
gccgaacacggcaaacagctggatatcgacgccggcgtgctggcccagctgccgctgatg
aaggcgatgaccgaggcgcgcattgcctggcgcaccgaacatgccctggtgttcccggat
cgccccgactacgacttcgagctgggcgagaacggcgaagtgctggccatccacgtcgag
ccgcgccgcatcgccaaccgcatggtagaagagtcgatgatcgccgccaacatctgcgca
ggccgcgtgctcggcaagcaggtcggctacggcatcttcaacgtccacaccggctttgac
gaagagtctctcgacggcgccatcgatctgctgaagagcgccgaggccccattcgagaaa
gaagagatcgccagcctcaccggtttctgcgccctgcgccgctggatcgacaacctcgac
acccgctggctggacggcaagatccgccgcttccagagctatgcgctgatgtccgccgag
ccgggtgcccactatggcctggggctggatgcctacgccacctggacctccccgatccgc
aagtacggcgacatggtcaaccatcgcctgctgaaagccgtcatcgccggcaagaccccg
ggcgagcgcccgagcctggagctcaccgagcacctgaccgcctgccgccgtctgcaccgc
atggtggagcgcgacatcggcgactggctctatgtccgctacctcaaggccgatgccggc
accgacaaggtgttcaacgccgagatcatcgacgtgatgcgcgccggcctcaagctgcgt
ctgcgcgagaacggcgccgtggtgttcatgcccgcccgccatatcctcgacaacaaggat
cggctggagtgcaactgggacaacggccgcgtctatctggacaagaccgaggtggtctac
gagctcggccagatcatcgaggtcaagctgaccgaagcggtggaagagacccgttccctc
atcgccaagccggcggtggagctggtgccgggcccggcgccggtcgcccccaccagcgag
gccgatgccgcgcctaccgacgaggcccccaaggccgaataa
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