Aeromonas sp. 1805: E5E96_13485
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Entry
E5E96_13485 CDS
T10912
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aerz Aeromonas sp. 1805
Pathway
aerz03030
DNA replication
aerz03430
Mismatch repair
aerz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E5E96_13485 (dnaE)
03430 Mismatch repair
E5E96_13485 (dnaE)
03440 Homologous recombination
E5E96_13485 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aerz03032
]
E5E96_13485 (dnaE)
03400 DNA repair and recombination proteins [BR:
aerz03400
]
E5E96_13485 (dnaE)
Enzymes [BR:
aerz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E5E96_13485 (dnaE)
DNA replication proteins [BR:
aerz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E5E96_13485 (dnaE)
DNA repair and recombination proteins [BR:
aerz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E5E96_13485 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QJT18194
LinkDB
All DBs
Position
2811193..2814672
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMVDGLQKINPIVGAAAANNMPALALTDQMNMCGLVRFYGAAHGK
GVKPIVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LAEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCLAFYQTHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFALPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKHCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKRSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLQPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQQIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRARLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatccacctgcgggtccactccgacttctccatggtcgatggc
ctgcagaagatcaatcccatcgtcggtgcggcggcggccaacaacatgccggcgctggcg
ctgaccgaccagatgaacatgtgcggcctggtgcgcttctacggcgccgcccacggcaag
ggcgtcaagcctatcgtcggggccgacttctgggtgcagagtgacgagctcggcgacgag
cagttccgcctcaccctgctcgccatggacaacgacggctaccagaacatcaccctgctc
atctcccgcggctatcagcgcggtcacgtgcaggggcgcccggtcatcgacaaggcctgg
ctggccgaacacgccaagggggtgatcgtgctctccggcgggcgcgagggggacgtgggc
aagttcctgctcaagggcaaccgccagatgaccgagcagtgtctcgccttctatcagact
cacttccccgacgcctattacctggagctgctgcgtaccggccgtcccgatgaagaggtc
tacctgcacatggcggtggcgattgctaccgagttcgcgctgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgatttcgacgcccacgagatccgggtcgccatccac
gatggctataccctgatggacaagcgtcggccgcgccgctacagcccgcagcagtatctg
cgcagccaggaggagatggcggagctgtttgccgacatccccgaggcgctggagaacacg
gtggagatcgccaagcactgcaacgtgacggtgcgcctcggcgaatacttcctgcccaac
ttcccgaccggtgacatgaccaccgaagacttcctggtcatgaagtcgaaagaggggttg
gaggagcggctggaattcctgttcccggatccggcggtgcgggccgagcgccgtcccgag
tatgacgagcggctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcatccccgttggcccg
ggccggggctcgggggcgggttccctggtggcctacgccctcaagatcaccgatctcgat
ccgctggaatttgacctgctgttcgaacgtttcctgaaccccgagcgggtatccatgccc
gacttcgacgtcgacttctgtatggaccggcgcgacgaggtgatcgaccacgtctccgag
atgtacggccgggaggcggtatcccagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggacgtgggccgggtgctgggccacgcctacggcttcgtcgatcgcatctcc
aagctgatcccgccggatccgggcatgaccctggccaaggcgttcgaggccgaacccaag
ctgcccgagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcgcgccgg
ctggaaggggtggtgcgcaacgccggtaaacacgccggtggcgtggtgatcgcgcctacc
aagatcaccgacttcgcgccgctctactgcgatgacgaaggccatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccgggctggtgaagttcgacttcctcggcctgcgc
acgctcaccatcatcgactgggcgctcggcatgattaacccgcgccttgccaaagagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagcgctcgttcgacctgctg
cagcgctacgagaccaccgcggtattccagctggaatcccgcggcatgaaggatctcatc
aagcggctgcagcctgactgcttcgaagacatgatcgctctggtggcgctgttccgcccg
ggcccgctgcagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctatccggacgagaagtggcagcacgagagtctgcagccgatcctcgagcccacc
tacggcatcatcctctatcaggagcaggtgatgcagattgcccagaccctggcgggttat
acgctgggtggcgcggacatgctgcgccgggcgatgggcaagaaaaaacccgaagagatg
gccaagcagcgggccggcttcgaggagggggcggtcaagaacggcgtcgacggcgaactg
gcgatgaagatcttcgatctggtggagaagtttgcaggctacggcttcaacaaatcccac
tccgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcg
gagttcatggcggcggtgatgactgccgacatggacaacaccgacaagatagtgaccctg
gtggacgagtgccagcggatggggctcaccgtgatcccgccggacgtgaacaccggtcgc
taccgcttcagcgtcaacgaagatggtcacatcgtctacggcatcggcgcggtgaagggg
gtgggggaaggtcccatcgatgcgatcctggaagcgcgggatcgggacgggccgtttcgc
gatctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcattctctccggcgccatggaccggctcggcccccaccgcgccgccctgatggcg
accctggaggaggcgatgcgcgccgccgagcagcacgccaaggcgcaggcggtgggtcag
gtcgacatgttcggcgtgctcaccgaagagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcctgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctcaccggtcaccccatcaaccagtacagcggcgagctgcgtcgttatacctctggccgg
ctgtgcgatctgcaccccacctcccgcgataccgtgaccacggcggcggggctggtgatc
gcggcgcgcagcatggtgaccaagcgtggcaacaagatggggatcttcaccctggacgac
cgttccggtcgcctcgatgtgaccctgttcagtgaagcgctggaaaagtatgaagaattg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagagagcgttttgcc
agggcgatccgcatctctctcgatgaacagcagattgatgatcgttttttcccgcgtttg
tgcgagattttggaacccgcccgtgccggagtttgtccggttcaggtaaactatcgtcgc
cccggttcccgggcgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgcgtcctgcttggacgagagcgggttgaattggtttttgattag
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