Aeromonas sp. 1805: E5E96_17705
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Entry
E5E96_17705 CDS
T10912
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aerz Aeromonas sp. 1805
Pathway
aerz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5E96_17705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aerz03019
]
E5E96_17705
03400 DNA repair and recombination proteins [BR:
aerz03400
]
E5E96_17705
Enzymes [BR:
aerz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
E5E96_17705
Messenger RNA biogenesis [BR:
aerz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E5E96_17705
DNA repair and recombination proteins [BR:
aerz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E5E96_17705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TniB
AAA_22
NADH_4Fe-4S
Motif
Other DBs
NCBI-ProteinID:
QJT18948
LinkDB
All DBs
Position
complement(3737446..3739374)
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AA seq
642 aa
AA seq
DB search
MISSLLTRHFGFDRLRPGQEAVISRLLAGQSAAAIFPTGSGKSLCYQLPALALPHLTLVI
SPLIALMHDQLAFLRSKGIAAATLDSSLTPEESRRVMQQASDGQLKILMISVERLKNERF
RRFIQQVPLSMLVVDEAHCISEWGHNFRPDYLKLPDYRRELQIPQVLLLTATATPAVMAD
MQAKFEIEDEGLIVTGFYRANLDLAVVPLPDEARDGWLHAELARDPAAPTIIYVTLQHTA
EQCAARLQQAGIRARAYHAGLDATLRSQIQYDFMAGKLDCIVATIAFGMGIDKADIRRVI
HYDLPKSIENYSQEIGRAGRDGLPSRCMVLANRSQLPVLENFVYGDTPDRTAIVTLLEIL
QQSGSEWEFGLLRLSNDTNIRQLPLKTLLVYLEMAGIIAPAYSYFAEYRFKFVLDKADIL
ARFNPARRQFLEQVFASAPQARSWCTMDFEALWQGYQGERSRAAAALDYLQQQGWIELES
KQMTEVYRVLQQDLDIAPLADQLHALFEKKEQSELARLQALLGFFTSSSCLSHELARYFA
DQAAPTHCGHCSVCRGEVAQLTSLPSRTLPNEQGLRAWCDPLVALCHSRDPRILTRFLCG
ITTPLTTRLKARSLAGFGQLASHPFADVLAAVSNIYTARQQG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatctcatccctgttgacccgtcacttcggcttcgatcggttaagaccgggacaggag
gcggtgatcagccgattactggccggccaaagtgccgccgccatctttcccaccggctcc
ggcaagtccctctgttatcagttgccggcgctagccctgccccatctgaccctggtgatc
tcgccgctgatcgcgctgatgcacgatcagctcgcttttttgcgcagcaaggggatcgcc
gccgccaccctcgactcgagcctgaccccggaggagagccgccgggtgatgcagcaggcc
agcgatggccagctcaagatcctgatgatttcggttgagcggctcaaaaacgaacgcttt
cgccgtttcatccagcaggtaccgctgtcgatgctggtggtggacgaggcgcactgcatc
tcggagtggggtcacaactttcgacccgactacctcaagctgccggattaccgccgtgaa
ttgcagatcccgcaggtgttgctgctgacggccaccgccaccccggcagtcatggccgac
atgcaggccaaattcgagatcgaggatgagggactcatcgtcaccggcttttatcgcgcc
aacctggacttggccgtggtgccgctgcctgacgaggctcgcgatggttggctgcatgcc
gagctggctcgtgaccccgccgcaccgaccatcatctatgtcaccctgcagcacaccgca
gagcagtgcgccgcccgcttgcaacaagccggcatcagagcgcgcgcctatcacgccggg
ctcgatgccaccctgcgcagccagatccagtacgacttcatggccggcaagctggactgc
atcgtggcgaccatcgccttcggcatggggatcgacaaggccgacattcgccgggtgatc
cattacgatctgcccaaatccatcgaaaactatagtcaggagataggccgcgccggccgg
gatggtctgccttcccgctgcatggtactggccaatcgcagccagttgccggtgctggaa
aacttcgtctatggcgacaccccggacagaacggccatcgtcaccttgctcgagatcctg
caacaaagcggcagcgagtgggaatttggcttgctgcgcctctccaacgacaccaatatc
cgccagctgccgctgaaaaccctgctggtctacctggagatggcaggcatcatagcgccg
gcctacagctattttgccgagtaccgcttcaagttcgtgctggacaaggccgacatcctg
gcccgtttcaatccggcgcgacgccagtttctggagcaagtgttcgccagtgccccgcag
gcgcgcagctggtgcaccatggacttcgaggcgctctggcagggttatcagggggagcgg
tcgcgggccgctgccgcgctggattatctgcagcagcaaggctggatcgagctggagagc
aagcagatgaccgaggtctatcgggtgctgcaacaagatctggacatagcaccgctggcc
gatcagctgcacgcactgtttgaaaagaaagaacaaagcgagctggcgcgtctgcaggca
ttgctgggtttctttacctccagcagttgtctgagccatgagctggcccgctactttgcc
gatcaggccgcgcccacccattgcgggcactgctcggtctgtcggggagaggtggcgcag
cttacctccttacccagccggacactccccaatgaacaggggctcagagcctggtgcgat
ccgctggtagccctgtgtcacagtcgggatccccgcatcctgacgcgtttcctgtgtggc
atcaccaccccgctcaccacccggctcaaggccagaagcctggctggattcggccagctg
gcgtcccacccctttgccgatgtgctggcggccgtatccaacatttataccgctcgccaa
cagggataa
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