Aeromonas sp. 1805: E5E96_19970
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Entry
E5E96_19970 CDS
T10912
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
aerz Aeromonas sp. 1805
Pathway
aerz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aerz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
E5E96_19970 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aerz03400
]
E5E96_19970 (xseA)
Enzymes [BR:
aerz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
E5E96_19970 (xseA)
DNA repair and recombination proteins [BR:
aerz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
E5E96_19970 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QJT19333
LinkDB
All DBs
Position
4234762..4236126
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AA seq
454 aa
AA seq
DB search
MNYRNEPSQSRQQQVFTVTRLNSAVRMILEQDLGLVWLTGELSNLAMPSSGHWYFSLKDM
SAQVRCAMFKGNNRRVAFRPQDGMQVLVQARVSLYEPRGDYQLIIESMQPAGDGVLALRF
EELKRRLGAEGLFDEGRKRPLPREPRAVGLVTSATGAALHDMLTVLKRRAPDLPVFIYPT
QVQGSAAIGQIVSAIALANRRAEVDVLIVGRGGGSLEDLWCFNEEAVARAIAHSAIPVVS
AVGHEVDVTISDFAADLRAPTPSAAAELVAPDQSARAQRLAHLKQQLLQAMKRLQTAARH
DFILLQKRLDHQDPKRRLEQQSQRLDELSARLQQLMNHRLHQGERRLANLELRLQGKSPE
RLLAAGKRRHQLAEERLHALIAKRRDLADHRLAMLSARLDGVSPLATLGRGYSITRTARG
EVISRAAQVDAGQTLVTQLAEGQLRVRVEEVHQP
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
ttgaactaccgcaacgaaccgagtcaaagcagacaacagcaggtctttaccgtcacccgc
ctcaacagcgccgtgcgcatgatcctggagcaggatctggggctggtgtggctgaccggc
gagctctccaacctggcgatgccaagctccggccactggtacttctcgctcaaggacatg
tcggcccaggtgcgctgcgccatgttcaagggcaacaaccggcgggtggcgtttcgcccg
caggatggcatgcaggtactggtgcaggcgcgggtctccctctatgagccgcgcggcgac
taccagctgatcatcgaatcgatgcagccggcgggcgacggcgtgctggcgctgcgcttt
gaggagctcaagcgtcgtcttggcgccgaggggctgttcgacgaagggcgcaaacggccg
ttgccgcgcgaaccgcgcgcggtggggttggtcacctcagccaccggcgctgccctgcac
gatatgctgacggtgctcaaacgccgcgcaccggatctgccggtgtttatctaccccacc
caggtgcaggggagcgccgccatcggccagatcgtctctgccattgccctggccaaccgc
cgcgccgaggtggatgtgctgatcgtcgggcgcggcggcggctcgctcgaagatctctgg
tgcttcaacgaagaggcggtggcgcgcgccatcgcccactccgccataccggtggtgagc
gcggtgggccacgaggtggatgtcaccatcagcgactttgccgccgacttgcgcgccccg
accccgtcggcggcggccgagctggtggcgccggatcagagcgcccgcgcccagcgcctc
gcccatctcaagcagcaactgctgcaggcgatgaaacgcctgcagaccgccgcccgccac
gatttcatcctgctgcaaaagcggctcgaccatcaggatccgaagcggcggctggagcag
caatcccagcgcctcgacgagctctccgcccgtttgcagcaactgatgaatcaccgactg
catcagggagaacggcgcctcgccaacctggagctgcgcctgcagggcaagagcccggag
cgcttgctggccgccggcaagcgtcgccaccagctggccgaggagcgcctccatgccctc
atcgccaaacgccgggatctggccgaccaccgcctcgccatgctcagcgcccgcctcgac
ggggtgagcccgctcgccaccctgggtcgcggctactccatcacccgcaccgcgcgtggt
gaagtcattagccgcgccgcccaggtggatgccggccagacgctggtcacccagcttgca
gaggggcagctgcgggtgcgggtggaagaggtccaccagccataa
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