Aeromonas sp. ASNIH5: C2U30_02920
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Entry
C2U30_02920 CDS
T05873
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
aes
Aeromonas sp. ASNIH5
Pathway
aes03030
DNA replication
aes03430
Mismatch repair
aes03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C2U30_02920 (holB)
03430 Mismatch repair
C2U30_02920 (holB)
03440 Homologous recombination
C2U30_02920 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aes03032
]
C2U30_02920 (holB)
03400 DNA repair and recombination proteins [BR:
aes03400
]
C2U30_02920 (holB)
Enzymes [BR:
aes01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C2U30_02920 (holB)
DNA replication proteins [BR:
aes03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C2U30_02920 (holB)
DNA repair and recombination proteins [BR:
aes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C2U30_02920 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
AAA_5
Mg_chelatase
zf-CXXC
Rcat_RNF216
Motif
Other DBs
NCBI-ProteinID:
AUT40750
LinkDB
All DBs
Position
complement(655307..656254)
Genome browser
AA seq
315 aa
AA seq
DB search
MYPWLIPDWHALSETARAGRLGHAWLLLGDPGLGKEQLAERLARLHLCQHPQRGEPCGQC
HSCQLFEKGHHPDLGTLGPEGKTIGVEAIREICSRLQSTSQLGRGKVVIIQEAERMTESA
ANALLKTLEEPAGDSLLLLIASRVSRLLPTILSRCHKHVCQLPSEGETLAWLAEQGHQAT
QAQVRICQGAPLRVLSYIEAQQDDARRALLDGFVSLASAPTRTANVCAQLAEDTQARLHW
LQLFLCDALKLQAGCGHHQLAMPDLASLSQQLAERHSSERLLEAEQQLVVLKEACQPGQL
SNPTIHLMNWLNRWL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtatccctggctgatcccggattggcatgccctgagcgagacggcccgggccggacgg
ctcgggcacgcctggttgctgctaggcgatcccggtcttggcaaggagcagcttgcagag
cgactggcgcgactgcacttgtgtcagcatccacaacgaggtgagccctgcggtcagtgc
cactcctgccaactgtttgagaaggggcatcacccggatcttggcaccctggggcccgag
ggcaagaccataggtgtcgaagccatccgggagatttgcagccgcctccagagcacgtcc
cagctcggtcgcggcaaggtggtgatcattcaggaggcggagcgcatgacggagtctgcc
gccaatgctttgctgaagacgctggaagagccggctggcgacagtctgttgctgctcatc
gcatcccgggtatctcgcctgctccccaccatcttgagccgttgtcacaagcatgtctgc
cagctcccctctgagggggagacccttgcctggctcgccgagcagggccatcaggccacc
caggcccaggtgcggatctgccagggtgcgccgctgcgggtgctgagctacatcgaagca
cagcaagatgatgccagacgggcattgctcgacggatttgtctcgctggcatcggccccc
acccgtacggcgaatgtctgtgcccagttggccgaggatactcaggcccggctgcactgg
ttgcagctcttcctgtgcgatgccctcaagcttcaggctggctgcggccatcatcaactg
gcaatgccggatcttgcatcactcagccagcaactggcagagagacactccagcgaacgg
ctcctggaagctgaacagcagctggttgtgctgaaagaggcttgtcagccaggacagctt
tccaatcccaccatccatttgatgaactggctcaatcgctggttataa
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