Aeromonas sp. ASNIH5: C2U30_03160
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Entry
C2U30_03160 CDS
T05873
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aes
Aeromonas sp. ASNIH5
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aes03016
]
C2U30_03160 (rnd)
Enzymes [BR:
aes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C2U30_03160 (rnd)
Transfer RNA biogenesis [BR:
aes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2U30_03160 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AUT44205
LinkDB
All DBs
Position
complement(710968..712080)
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AA seq
370 aa
AA seq
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MQYQLISQQAELDQYLASLADVPLAIDTEFVRTRTYYPQLGLFQIYDGKQLALLDPLTLD
LSGLWQRLGRAGQIAILHASGEDLELIQHQAGHLPNQMHDTQLAAAFLGHGVSVGFGALV
NEFLGVELEKDQARTDWLARPLTPRQLEYAAADVFYLMPLYEKVMARLRESGKFPWFEQE
CQNHSARKTQGSDPRQAYLEIVNAWQLGRRELTILRELAAWRQQEAVRRDFALNFVVKEL
HLFKVAERRPASLRDLNELGLSPIEIKIHGKRMLDIVAAAQQSDPASWPDPIRRLVDFPQ
YKAELKRIKAMVEEKAKASNIPPELVASKKIIHQYFTWSWRMSAEERARADKPMLLQGWR
HELVGHLLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatcaactcatttcacagcaagccgaactggatcagtatctcgcttctctggcc
gacgttcccctggccatcgataccgaattcgttcgcacccgtacctactatccccagctc
ggtctgttccagatctacgatggcaagcagcttgccctgctcgatcccctgaccctggat
ctctccggtttgtggcagcgcctcggtcgggccggacagattgccatcctgcacgcctcc
ggtgaggatctggaactcatccagcatcaggcgggtcacctgcccaaccagatgcacgat
acccagctggcggcagccttcctgggtcatggcgtgtcggtggggtttggcgccttggtc
aacgaattcctcggggtcgagcttgagaaggatcaggcccgtaccgactggctggcgcgc
ccccttacccctcgtcagctggaatatgccgcggcggatgtcttctacctcatgcccctc
tacgagaaggtgatggccagactgcgcgagagcggcaagttcccctggttcgagcaggag
tgccagaaccactccgcccgcaagactcagggcagcgatccccgtcaggcctacctcgag
atagtcaacgcctggcaactgggtcgccgcgagctgaccatcctgcgcgagctggccgcc
tggcgccagcaggaagcggtacgccgggattttgccctcaacttcgtggtcaaagagctg
cacctgttcaaggtggcggagcgtcgtcccgcttcgcttcgggatcttaacgagctgggc
ctctcgcccatcgagatcaagatccacggcaagcggatgctggacatcgtcgccgccgcc
cagcagagcgaccctgcgagctggcccgatcccatccgccgtctggtggacttcccccag
tacaaggccgagctcaagcgcatcaaggccatggtggaggagaaggccaaggccagcaac
attccaccggagctggtggcgagcaagaagatcatccaccagtacttcacctggagctgg
cgcatgagtgccgaggagcgggccagggcggacaagcccatgctgctgcaagggtggcgt
catgagctggtaggccacctgctggcccagtga
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