Aeromonas sp. ASNIH5: C2U30_04560
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Entry
C2U30_04560 CDS
T05873
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aes
Aeromonas sp. ASNIH5
Pathway
aes03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aes00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C2U30_04560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aes03400
]
C2U30_04560
Enzymes [BR:
aes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
C2U30_04560
DNA repair and recombination proteins [BR:
aes03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
C2U30_04560
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2U30_04560
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U30_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
WSS_VP
MIOS_WD40
Motif
Other DBs
NCBI-ProteinID:
AUT41034
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All DBs
Position
1027556..1029070
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AA seq
504 aa
AA seq
DB search
MVYHAGNCGAWHPHPGARRRRHRILLSSNMSTSAHPASGPTFYFHDYETFGISPAKDRPS
QFAGIRTDADFNVIGEPLVIYCKPPADYLPEPEACLITGITPQKAMKDGLCEADFIRQIH
EQFAAPGTCVLGYNSIRFDDEVTRYTLYRNFYDPYAYAWQNGNSRWDILDMLRACYALRP
QGIEWALDDEGKPSFRLEKLTVANGVAHANAHDALSDVLATIEMARLVKKAQPKLFEYLF
DLRNKNKVKALIDVVTMKPLVHVSGMFSPWQGCASWVSPLAWHPTNQNAVIMVDLTRDPT
PLIELSCEEIRERLYTKKEELGDLAGIPVKLVHINKCPVLAPAATLTPERADELGINRAQ
CRKSLDLLRAHPEVREKLVEVFNQEFAGSTDGDPDTQLYAGFFGHGDKSTMDLVRATPAD
LLGEREFAFTDPRLPEMLFRYRARNWPHTLSEAEQKRWRLHCSDYFSRRLPDYVPRLEAL
AEQNQGNERNFAILKSLYHYLENL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtttaccatgcaggcaattgcggtgcatggcacccccacccaggcgccaggcgccgc
cgtcatcggatactcctttcgagcaacatgagcacatcagcgcacccggccagcgggccc
acgttctatttccacgactacgagaccttcggcatcagtccggccaaagacaggccgtcg
cagtttgcgggcattcgcaccgacgcggatttcaacgtcatcggcgagccgctggtgatt
tactgcaagccgccggcagattacctgccggagccggaagcctgcctcatcaccggcatc
acgccgcaaaaggcgatgaaggacggcctgtgcgaggcggacttcatccgccagatccac
gagcagttcgccgccccgggcacctgcgtgctgggttacaacagcatccgcttcgatgat
gaagtgacccgctacaccctctatcgcaacttctatgacccctatgcctacgcctggcag
aacggcaactcccgctgggacatcctcgacatgctgcgggcctgctacgccctgcgcccg
caggggatagagtgggccctggacgacgagggcaagccgagcttccggctggagaagctg
acggtggccaacggcgtggcccacgccaacgcccacgatgcgctctcggatgtgctggcc
accatcgagatggccaggctggtgaaaaaagcccagcccaagctcttcgagtacctcttt
gatcttcgcaacaagaacaaggtgaaggccctcatcgacgtggtgaccatgaaacccctg
gtgcacgtctccggcatgttctccccctggcaggggtgcgcaagctgggtgtcgccgctc
gcctggcaccccaccaaccagaacgcggtgatcatggtggatctgacccgtgacccgact
ccgctcatcgagctctcctgcgaggagatccgcgagcgcctctacaccaaaaaagaggag
ctgggggatctggccggcattccggtcaaactggtgcacatcaacaagtgcccggtactg
gccccggccgccaccctgacgccggagcgggcggacgagctgggcatcaatcgggcacag
tgccgcaagagcctggatctgctgcgggcccaccccgaggtgcgggaaaaactggtggag
gtattcaaccaggagtttgccggcagcaccgacggcgaccccgacacccagctctacgcc
ggtttcttcggccacggcgacaagtccaccatggatctggtgcgcgccaccccggcggat
ctgctgggggagcgggagtttgccttcacggatccccgtctgcccgagatgctgtttcgt
taccgcgcccgcaactggccccacaccttgagcgaagcggagcagaagcgctggcgcctg
cactgcagcgactacttcagccgccgcctgccggattatgtgccgcgcctggaagccctg
gcggaacagaaccaggggaacgaacggaactttgcgattctaaagagtctctatcactac
cttgaaaatctgtga
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